Gene detail information of Glyur000178s00013192 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17210.1 | 2.00E-43 | heat stable protein 1 |
| NR | KHN10211.1 | 1.16E-64 | Hypothetical protein glysoja_017815 [Glycine soja] |
| COG | YP_003372990.1 | 3.00E-22 | stress responsive alpha-beta barrel domain-containing protein [Pirellula staleyi DSM 6068] |
| Swissprot | tr|Q9LUV2|POP3_ARATH | 6.00E-55 | Probable protein Pop3 |
| trEMBL | tr|I1JUU1|I1JUU1_SOYBN | 4.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G08730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 79709 | 81313 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000178s00013192.1 | PF07876.7 | Dabb | 8 | 103 | 8.40E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 177.989 |
| SRR1783600 | control | 179.606 |
| SRR1783602 | moderate drought stress | 121.568 |
| SRR1811619 | moderate drought stress | 121.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 107.065 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 106.866 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.659 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.116 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 60.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.232 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 84.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 82.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 154.999 |
| SRR2868004 | Drought Stress (root) | 85.904 |
| SRR2967015 | Control (root) | 89.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 136.303 |
| SRR9715740 | Leaf | 148.370 |
| SRR9715741 | Leaf | 129.297 |
| SRR9715739 | Root | 44.965 |
| SRR9715742 | Root | 39.698 |
| SRR9715743 | Root | 43.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.138 |
| SRR8749028 | MeJA induced 9h | 67.544 |
| SRR8749029 | MeJA induced 9h | 60.256 |
| SRR8749030 | Uninduced | 20.478 |
| SRR8749031 | Uninduced | 6.880 |
| SRR8749032 | Uninduced | 16.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 109.011 |
| SRR8400027 | Control - Root | 121.360 |