Gene detail information of Glyur000178s00013190.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19210.1 | 3.00E-38 | Integrase-type DNA-binding superfamily protein |
| NR | NP_001238500.1 | 1.89E-94 | dehydration-responsive element binding protein 3 [Glycine max] |
| Swissprot | tr|Q84QC2|ERF17_ARATH | 3.00E-53 | Ethylene-responsive transcription factor ERF017 |
| trEMBL | tr|Q2VEU3|Q2VEU3_SOYBN | 7.00E-95 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 72048 | 72671 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000178s00013190.1 | PF00847.15 | AP2 | 15 | 65 | 3.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.519 |
| SRR1783600 | control | 0.525 |
| SRR1783602 | moderate drought stress | 0.693 |
| SRR1811619 | moderate drought stress | 0.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 286.837 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 275.924 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.358 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.312 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 81.395 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 80.633 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 295.154 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 293.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.200 |
| SRR2868004 | Drought Stress (root) | 16.997 |
| SRR2967015 | Control (root) | 291.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 760.864 |
| SRR9715740 | Leaf | 772.698 |
| SRR9715741 | Leaf | 723.631 |
| SRR9715739 | Root | 238.694 |
| SRR9715742 | Root | 358.909 |
| SRR9715743 | Root | 334.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.676 |
| SRR8749028 | MeJA induced 9h | 20.525 |
| SRR8749029 | MeJA induced 9h | 6.634 |
| SRR8749030 | Uninduced | 13.956 |
| SRR8749031 | Uninduced | 5.011 |
| SRR8749032 | Uninduced | 23.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.321 |
| SRR8400027 | Control - Root | 44.119 |