Gene detail information of Glyur000177s00010921 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27190.1 | 3.00E-34 | NB-ARC domain-containing disease resistance protein |
| NR | XP_004498272.1 | 0 | PREDICTED: uncharacterized protein LOC101492873 [Cicer arietinum] |
| Swissprot | tr|P60838|DRL1_ARATH | 3.00E-32 | Probable disease resistance protein At1g12280 |
| trEMBL | tr|A0A072VGK3|A0A072VGK3_MEDTR | 0 | NBS-LRR type disease resistance protein {ECO:0000313|EMBL:KEH40573.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00177 | 196094 | 206184 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000177s00010921.1 | PF00931.17 | NB-ARC | 172 | 362 | 1.00E-39 |
| Glyur000177s00010921.2 | PF00931.17 | NB-ARC | 172 | 362 | 1.00E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.916 |
| SRR1783600 | control | 1.968 |
| SRR1783602 | moderate drought stress | 1.610 |
| SRR1811619 | moderate drought stress | 1.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.528 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.477 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.093 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.122 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.041 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.039 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.726 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.435 |
| SRR9715740 | Leaf | 3.327 |
| SRR9715741 | Leaf | 1.603 |
| SRR9715739 | Root | 0.132 |
| SRR9715742 | Root | 0.452 |
| SRR9715743 | Root | 0.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.103 |
| SRR8400027 | Control - Root | 2.955 |