Gene detail information of Glyur000177s00010888 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04830.2 | 6.00E-66 | Nuclear transport factor 2 (NTF2) family protein |
| NR | XP_004496115.1 | 4.91E-108 | PREDICTED: uncharacterized protein LOC101493409 isoform X1 [Cicer arietinum] |
| trEMBL | tr|C6TBE6|C6TBE6_SOYBN | 3.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00177 | 1199 | 5236 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.477 |
| SRR1783600 | control | 0.490 |
| SRR1783602 | moderate drought stress | 0.696 |
| SRR1811619 | moderate drought stress | 0.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.665 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.665 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.576 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.551 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.110 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.113 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.790 |
| SRR2868004 | Drought Stress (root) | 17.184 |
| SRR2967015 | Control (root) | 10.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 90.067 |
| SRR9715740 | Leaf | 94.997 |
| SRR9715741 | Leaf | 109.695 |
| SRR9715739 | Root | 0.306 |
| SRR9715742 | Root | 0.781 |
| SRR9715743 | Root | 0.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.308 |
| SRR8749028 | MeJA induced 9h | 3.543 |
| SRR8749029 | MeJA induced 9h | 2.876 |
| SRR8749030 | Uninduced | 5.403 |
| SRR8749031 | Uninduced | 2.664 |
| SRR8749032 | Uninduced | 0.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.162 |
| SRR8400027 | Control - Root | 10.209 |