Gene detail

Gene detail information of Glyur000176s00012122.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G30180.1	0	brassinosteroid-6-oxidase 2
NR	Q69F95.2	0	RecName: Full=Cytochrome P450 85A; AltName: Full=C6-oxidase [Phaseolus vulgaris]
COG	YP_001519436.1	3.00E-49	cytochrome P450 family protein [Acaryochloris marina MBIC11017]
Swissprot	tr\|Q69F95\|C85A_PHAVU	0	Cytochrome P450 85A
trEMBL	tr\|I1N4P8\|I1N4P8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G50790.1}

Sequence

Transcript Sequence

>Glyur000176s00012122.1
ATCAATTTTTTTTTTAATACATAGCTCATTTGAGTTGTGCACTCCCCTGAATTCCTTCCCAAAAGCCAATTCCTTTTTCCACTTTTTCCCTTTTCCAATCTCTTTTAATTCATTTCCTGGGGTTGGTTTATTTATTTATTTTCCATTCTCCAAGACATACAATAGGGAGGGGGTGTGCTACTCCCCTCTAGAGTGGCGATTTTTGTCCACTCTCATGTGCAAATGGTAGCTCAAGGGCCTATATATATCTATATGTGTTGGTGTGTGTACACTTGTGGTGGTGACTCCAACTGAAGCAAATTCTGTTACTATCTTCCAAAAGTTTTTGTGGGTAGGATTGGGTTTGGAGTTTGGAGCGCCAATGGCTGTGTTCATGGCAATGGTTGGTGTGGTCTTGGTGCTCTGTTTTTGCTCTGCTCTGTTGAGGTGGAATGAAGTGAGGTATAGGAGGAAAGGCTTGCCTCCAGGCACAATGGGGTGGCCTGTTTTTGGGGAGACAACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAAAACCAAAGGACAAGGTATGGCAGTTTTTTCAAATCACACATACTGGGATGTCCTACCATTGTATCCATGGATCCAGAGATTAATAGATACATACTGATGAATGAAGCAAAAGGGTTTGTTCCTGGGTACCCACAATCCATGTTAGATATCTTAGGAAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTGCTTTCCATCATTAGCCCCACCCTGATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACGCACTTGAGTGATTGGGATAACAAAGTCATCAACATTCAAGATAAAACTAAAGAGATGGCATTTCTCTCATCCCTGAAGCAGATTGCTGGTATGGAATCTAGCTCAATATCTCATCCATTCATGACGGAGTTCTTTAAGCTAGCAAGGAAGAGTATTATTAGCATTCTGAGTCAACTGCTAGAGGAAAGGAGAGCATCCCAAGATACCCATGTAGACATGCTGGGTTGCTTGATGGGAGGAGATGACAACAATCGATACAAACTAACTGATGAGGAAATCATTGATCTGATCATTACAATTATGTATTCGGGTTATGAAACTGTTTCAACTACATCAATGATGGCCTTGAAGTACCTCCATGATCACCCCAAAGTTCTTGAAGAAATGAGAAAAGAGCATTTTGCCATTAGAGAAAGGAAAAAGCCAGAAGATCCAATTGATTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTAGCTACAATAGTTAATGGGGTTCTGAGAAAAACAACTCATGACATGGAACTGAATGGCTATTTGATTCCTAAAGGGTGGAGGATATATGTATATACAAGAGAGATAAATTATGACCCAATTCTGTATCAAGATCCACTAACCTTTAACCCATGGAGATGGCTGGGTAACAGTCTAGAGTCACAAAGTCACTTCTTGATATTTGGAGGAGGCACCAGACAGTGTCCAGGGAAGGAGTTGGGGATAGCAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTAGGAGGAGACAAACTAATGAAATTTCCTAGAGTTGAGGCACCAAATGGACTGCACATTAGGGTCTCATCCTATTAACTAGGCTATTGTATATGTACAGTAATGAGATGAGATTATATTAGTACATAATAGGGTTTTTGTATTTTGCATGATATTAATTAATTAATGCTCTAACAAATTAGAAATTCAAGAAGTATTTTTTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00176	210336	214057	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP85A2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K12640	CYP85A2, BR6OX2	EC:1.14.-.-	Brassinosteroid biosynthesis	map00905

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000176s00012122.1	PF00067.17	p450	34	161	2.10E-05
Glyur000176s00012122.1	PF00067.17	p450	178	426	1.30E-51

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.307
SRR1783600	control	0.298
SRR1783602	moderate drought stress	0.196
SRR1811619	moderate drought stress	0.182

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.740
DRR006520	Root Summer glycyrrhizin high producing strain	0.703
DRR006521	Root Winter glycyrrhizin high producing strain	2.944
DRR006522	Root Winter glycyrrhizin high producing strain	2.802
DRR006523	Root Summer glycyrrhizin low producing strain	1.421
DRR006524	Root Summer glycyrrhizin low producing strain	1.368
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.859
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.800

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.656
SRR2868004	Drought Stress (root)	7.331
SRR2967015	Control (root)	5.437

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.120
SRR9715740	Leaf	3.470
SRR9715741	Leaf	3.552
SRR9715739	Root	0.093
SRR9715742	Root	0.196
SRR9715743	Root	0.182

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.695
SRR8749028	MeJA induced 9h	10.617
SRR8749029	MeJA induced 9h	22.663
SRR8749030	Uninduced	1.268
SRR8749031	Uninduced	4.273
SRR8749032	Uninduced	10.765

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.526
SRR8400027	Control - Root	1.875