Gene detail information of Glyur000176s00012100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15780.1 | 1.00E-40 | Pollen Ole e 1 allergen and extensin family protein |
| NR | KHN30305.1 | 2.31E-118 | hypothetical protein glysoja_037816 [Glycine soja] |
| COG | YP_004320956.1 | 2.00E-07 | LPXTG-motif cell wall anchor domain-containing protein [Aerococcus urinae ACS-120-V-Col10a] |
| trEMBL | tr|I1KWJ8|I1KWJ8_SOYBN | 1.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G27760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00176 | 87158 | 90164 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000176s00012100.1 | PF01190.12 | Pollen_Ole_e_I | 32 | 123 | 3.80E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 184.753 |
| SRR1783600 | control | 182.220 |
| SRR1783602 | moderate drought stress | 160.886 |
| SRR1811619 | moderate drought stress | 159.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.197 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.449 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2312.055 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2234.068 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.691 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 65.092 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.424 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.171 |
| SRR2868004 | Drought Stress (root) | 5.912 |
| SRR2967015 | Control (root) | 8.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.572 |
| SRR9715740 | Leaf | 0.915 |
| SRR9715741 | Leaf | 1.820 |
| SRR9715739 | Root | 38.548 |
| SRR9715742 | Root | 70.764 |
| SRR9715743 | Root | 56.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.025 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 98.997 |
| SRR8400027 | Control - Root | 98.052 |