Gene detail information of Glyur000175s00012083 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU20602.1 | 8.15E-77 | unknown [Glycine max] |
| trEMBL | tr|C6TFK0|C6TFK0_SOYBN | 3.00E-77 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU20602.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00175 | 280597 | 282483 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.551 |
| SRR1783600 | control | 1.445 |
| SRR1783602 | moderate drought stress | 1.474 |
| SRR1811619 | moderate drought stress | 1.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.695 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.721 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.782 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.582 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.125 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.271 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.881 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.480 |
| SRR2868004 | Drought Stress (root) | 4.663 |
| SRR2967015 | Control (root) | 5.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.256 |
| SRR9715740 | Leaf | 5.094 |
| SRR9715741 | Leaf | 6.597 |
| SRR9715739 | Root | 2.520 |
| SRR9715742 | Root | 6.297 |
| SRR9715743 | Root | 5.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.896 |
| SRR8749028 | MeJA induced 9h | 4.791 |
| SRR8749029 | MeJA induced 9h | 3.406 |
| SRR8749030 | Uninduced | 0.965 |
| SRR8749031 | Uninduced | 1.471 |
| SRR8749032 | Uninduced | 5.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.518 |
| SRR8400027 | Control - Root | 4.143 |