Gene detail information of Glyur000175s00012074 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52060.1 | 2.00E-52 | BCL-2-associated athanogene 1 |
| NR | XP_006579417.1 | 2.87E-154 | PREDICTED: uncharacterized protein LOC100792005 isoform X1 [Glycine max] |
| Swissprot | tr|Q0WUQ1|BAG1_ARATH | 2.00E-72 | BAG family molecular chaperone regulator 1 |
| trEMBL | tr|I1K0D4|I1K0D4_SOYBN | 1.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G03520.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00175 | 228355 | 230874 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000175s00012074.1 | PF02179.11 | BAG | 143 | 218 | 6.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.871 |
| SRR1783600 | control | 2.836 |
| SRR1783602 | moderate drought stress | 5.631 |
| SRR1811619 | moderate drought stress | 5.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.308 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.275 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.594 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.579 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.667 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.672 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.557 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.411 |
| SRR2868004 | Drought Stress (root) | 5.094 |
| SRR2967015 | Control (root) | 4.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.154 |
| SRR9715740 | Leaf | 3.423 |
| SRR9715741 | Leaf | 3.536 |
| SRR9715739 | Root | 0.269 |
| SRR9715742 | Root | 1.944 |
| SRR9715743 | Root | 2.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.157 |
| SRR8749028 | MeJA induced 9h | 2.292 |
| SRR8749029 | MeJA induced 9h | 4.295 |
| SRR8749030 | Uninduced | 2.122 |
| SRR8749031 | Uninduced | 5.462 |
| SRR8749032 | Uninduced | 5.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.423 |
| SRR8400027 | Control - Root | 9.633 |