Gene detail information of Glyur000175s00012069.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52020.1 | 2.00E-35 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004515795.1 | 2.20E-77 | PREDICTED: ethylene-responsive transcription factor ERF026-like [Cicer arietinum] |
| Swissprot | tr|Q9FJ90|ERF25_ARATH | 3.00E-47 | Ethylene-responsive transcription factor ERF025 |
| trEMBL | tr|K7KMY2|K7KMY2_SOYBN | 6.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G03540.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00175 | 207088 | 207648 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000175s00012069.1 | PF00847.15 | AP2 | 13 | 62 | 1.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.195 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 0.068 |
| SRR1811619 | moderate drought stress | 0.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.039 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.494 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.538 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.799 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.081 |
| SRR2967015 | Control (root) | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 45.196 |
| SRR9715740 | Leaf | 17.718 |
| SRR9715741 | Leaf | 24.646 |
| SRR9715739 | Root | 92.408 |
| SRR9715742 | Root | 90.117 |
| SRR9715743 | Root | 76.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.218 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.077 |
| SRR8749030 | Uninduced | 0.227 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.042 |
| SRR8400027 | Control - Root | 0.255 |