Gene detail information of Glyur000175s00012064 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51920.1 | 3.00E-135 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| NR | KHN14127.1 | 0 | Molybdenum cofactor sulfurase 3 [Glycine soja] |
| COG | NP_616873.1 | 4.00E-41 | hypothetical protein MA1950 [Methanosarcina acetivorans C2A] |
| Swissprot | tr|Q8LGM7|MOCOS_SOLLC | 3.00E-18 | Molybdenum cofactor sulfurase {ECO:0000255|HAMAP-Rule:MF_03050} |
| trEMBL | tr|I1K0E2|I1K0E2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G03590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00175 | 186078 | 187985 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000175s00012064.1 | PF00266.14 | Aminotran_5 | 206 | 394 | 1.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.020 |
| SRR1811619 | moderate drought stress | 0.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.026 |
| SRR2967015 | Control (root) | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.561 |
| SRR9715740 | Leaf | 3.449 |
| SRR9715741 | Leaf | 4.293 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.015 |
| SRR9715743 | Root | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.661 |
| SRR8749028 | MeJA induced 9h | 1.587 |
| SRR8749029 | MeJA induced 9h | 0.724 |
| SRR8749030 | Uninduced | 2.505 |
| SRR8749031 | Uninduced | 4.048 |
| SRR8749032 | Uninduced | 2.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.566 |
| SRR8400027 | Control - Root | 2.173 |