Gene detail

Gene detail information of Glyur000175s00012045

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G67360.1	5.00E-131	Subtilase family protein
NR	KEH31683.1	0	subtilisin-like serine protease [Medicago truncatula]
COG	YP_001709364.1	5.00E-87	peptidase [Clavibacter michiganensis subsp. sepedonicus]
Swissprot	tr\|O65351\|SUBL_ARATH	6.00E-164	Subtilisin-like protease (Precursor)
trEMBL	tr\|A0A072URI6\|A0A072URI6_MEDTR	0	Subtilisin-like serine protease {ECO:0000313\|EMBL:KEH31683.1}

Sequence

Transcript Sequence

>Glyur000175s00012045.1
ATGTTCAGAGCACACCGAACTAAGAAGAAAGAACTTGTCTCTCATTCTTCCATCAAGCAGAAAGTAAATTTTCTGTTGAACATGGATTATTTCCTTTTCCTTGCTTTCACTTTCGTGTTGAGCTTCCATATTCATTATGCTCAAGGAAGTGAACTGCTCCCTACCACTGGGAGTACCGAGACAAGCAGTTCAAAAATATACATTATCCATGTGGCGAAGCCAGAGGGTAAGATGTTTACTCAATCAGAAGATTTAGAAAGCTGGCACCATTCATTCATGCCAACTACTGTTATGAGCTCTAAGGAACAACCACGAATGATTTACTCATACCGGAATGTGCTGAGTGGAGCTGAGAGTTGTGGAAGGGAAAAATGGCTTTATTTCAGCTCATCCCGAAAGGATGCTTCATCGTCAAACCACACATACCCCAGAATTCTTGGGGTTGCAGCAACAAATGGGATTATGGAAGGACTCAAATTTTGGAAAGGGAGTCATTATTGGGGAATACCACCACCACCACCCAAATGGAAAGGGAGATGCGAACTTAATGGGACAGCTTGTAACAACAAACTAATTGGAGCAAGGTCCTTCAATGTCGCAGCGAAGTCAATGAAAGGAGAGCAAGCTGATGAGGCACCAATTGATGAGGATGGACATGGGACTCACACAGCAAGCACAGCGGGTGGTGCTTTTGTGGACCACGCAGAAGTACTAGGAAATGCCAAAGGCACGGCAGCAGGGATGGCCCCTTATGCACACCTGGCAATGTACAAAGTGTGCTTTGGAGAAGACTGCCCTGAGAGTGATATACTGGCTGCTTTAGATGCAGCTGTGGAGGATGGTGTGGATGTAATATCAATATCCCTTGGTCTAAGTGAGCCACCTCCATTTTTCAACGATAGCACCGCAATAGGCGCTTTTGCAGCAATTCAGAAGGGAATCTTTGTAAGTTGTTCAGCAGGAAACTTTGGCCCTCTCAGTGGCTCCTTAGTTAACGGAGCCCCATGGATCCTCACAGTTGGAGCAAGCACTATTGACAGAAGCATTGTAGCAACAGCAAAGCTTGGAAATGGGCAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCGACTTTTCTCCAACATTGTTGCCCTTAGCATATGCAGGAATGAATGGCAAACAAGAATCTTCACTTTGTGCTAATGGATCTTTGAATGGCATTGATTTTAAAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGGTGTAGCAAGAATTGCCAAAGGAGAGGAAGTAAAAAGAGCAGGTGGTGCCGCCATGATTCTCATGAATGATGAAATCAATGGCTTCAGTCTCTCAGCTGATGCACATGTCCTACCTGCAACGCATGTAAGCTATGCTGCTGGACTAAAGATTAAGGCCTATATAAACTCCACTGCAACACCTACAACAACCATTTTATTTAAGGGGACGATTATTGGAGACTCCCTGTCGCCAGCCGTGTCATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGATATCATAGGACCAGGTGTGAACATCCTAGCTGCCTGGCCATTCCCTCTGAATAACAGCACCAATTCAAAACTCACTTTCAACATTATGTCTGGCACATCAATGTCATGCCCACATCTCAGTGGCATTGCTGCTTTGCTTAAAAGCTCCCATCCTCATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACACACTAAATTTAGAAAACAAACCCATTGTTGATGAAACACTGCAGCCTGCAAATATCTTTGCTACAGGTTCTGGCCACGTGAATCCATCAAGAGCAAATGATCCTGGATTAGTTGGGATCATCGCACATAGAACAATTAAGTGCTCCAAGACTTCAAGCATTCCCGAAGGTGATCTCAACTACCCCTCATTTTCTGTTGTGCTTGGTTCCTCACAGACATTCACAAGGACTGTGACAAATGTTGGCGAGGCCCATTCATCTCATGTTGTCATAGTTACGGCACCAGAAGGGGTTGATGTGCAGGTCCAGCCAAATAAGCTTTACTTTTCAGAAGCAAACCAGAAAGAGACATATTCAGTGACATTCAGCCGTATAGGGTCGGGTAATAAGACAGGGGAATATGCTCAAGGGTTTCTAAAATGGGTCTCTGCCAAACACACTGTCAGGAGCCCTATCTCGGTCAAATTTGTATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00175	90752	93106	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000175s00012045.1	PF00082.17	Peptidase_S8	212	612	6.10E-35
Glyur000175s00012045.1	PF02225.17	PA	389	469	2.60E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.176
SRR1783600	control	0.171
SRR1783602	moderate drought stress	0.310
SRR1811619	moderate drought stress	0.278

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.298
DRR006522	Root Winter glycyrrhizin high producing strain	0.287
DRR006523	Root Summer glycyrrhizin low producing strain	0.063
DRR006524	Root Summer glycyrrhizin low producing strain	0.072
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.168
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.167

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.880
SRR2868004	Drought Stress (root)	21.810
SRR2967015	Control (root)	8.522

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.093
SRR9715740	Leaf	0.078
SRR9715741	Leaf	0.255
SRR9715739	Root	0.016
SRR9715742	Root	0.131
SRR9715743	Root	0.242

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.409
SRR8749028	MeJA induced 9h	0.249
SRR8749029	MeJA induced 9h	0.130
SRR8749030	Uninduced	0.038
SRR8749031	Uninduced	0.163
SRR8749032	Uninduced	0.287

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.960
SRR8400027	Control - Root	1.292