Gene detail

Gene detail information of Glyur000175s00012035.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G12300.1	1.00E-163	cytochrome P450, family 706, subfamily A, polypeptide 4
NR	XP_004515773.1	0	PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum]
COG	YP_630524.1	3.00E-32	cytochrome P450 family protein [Myxococcus xanthus DK 1622]
Swissprot	tr\|Q9SD85\|F3PH_ARATH	5.00E-119	Flavonoid 3'-monooxygenase
trEMBL	tr\|I1MUT7\|I1MUT7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G14320.1}

Sequence

Transcript Sequence

>Glyur000175s00012035.1
CTTTTTTTTAGTCAACTCTTAAACATTGCTAAATTATAATTAAAATACACTTTAAATTAAACTGATAATGAGTATATCTTTATGATTTTATTTATATTTATTAGTAGTATTATATTTTGTGATTATTTTTTTTTAGACACCTAGTATTGTCTTATGTTGGGATCGATGCGTATGGTATGCGATACCTGATTGTCTCAAGTCTTAACTCCGAGAGATTCCCTTCGTCGTGTTCTAATCTCATGGACGGTTCTTCCAAACCCATACNACGTCGTTTTATGCAGATTTTAAAGATTGCATTGATTGGCTCTCCTCTCTGGTTATTTGATTCATCTATCTCCTCAATCCTCATCTCGCATAGCACCCTTCGACAATAGCAACAGCAATAATAGCACCACCAATCCACCATGGCTTTACTCCCAAATTTGTTTCAAAACCTGAACCTGTTGAAGGACTGGTACGATGAAAGCACAGGCACAACCGTCGTGGTAGCATTTTTGGTCATTTCGGCGGTTACTTGGTACACGTGTCTCTACTTCCTCAACTCCAACAAAGCCCAAAGGCTGCCACCAGGCCCACCGGGCCTCCCTCTCTTCGGGAACCTTCTATCCCTGGACCCGGATCTTCACACCTACTTCGCCGGGCTGGCCCAGATCTACGGTCCAATTTTCAAGCTCCAACTCGGGAGCAAGCTCGGCATCGTGGTGACGTCATCTTCCATGGCCCGTCAGGTGCTCAAAGACCACGACACCGTCTTCGCCAATCGTGACGTGCCCGCCGCCGGCAGGGCAGCCACCTACGGCAGCTCCGACATAGTATGGACACCGTACGGGCCGGAGTGGCGGATGCTGAGGAAAGTGTGCGTGCTTAAGATGCTCAGCAACACCGCCCTGGATTCCGTGTACGACCTGCGCCGAACGGAGGTTCGGAAAACGGNCGGGTATGTGTATGATCGGGTCGGGTCTCCGGTGAGTGTTGGGGAGCAAGTGTTCCTGACGGTGTTGAACGTGATCACGAACATGATGTGGGGAGGGGCGGTGGAAGGAGCGGAGAGGGAAAGCCTTGGGACGGAGTTCAGGGAGGCGGTGGCGGAGATGACGCAGCTCCTCGGGAAACCGAACCTGTCGGATTTCTTTCCCTTGTTGGCACGGTTCGATTTGCAGGGTGTGGAGAAACAGATGCATGCGTTGGTCCCGCGTTTTGATAGAATATTCGAAAAGATGATTGGTGTTAGATCGAAGATGGAAGCGGAGGGAGAGGGGAGTCAAAGCAAGGATTTTCTGCAGTTTCTGTTGAATTTGAAGGAGGAAGGTGATTCCAANACGCCATTCACCATCACCCACGTTAAGGCCCTCCTCATGGACATGGTAGTGGGTGGATCTGACACATCCTCCAACACAATTGAGTTTGCGATGGCAGNGATGATGCACAAGCCGGAAGTGTTGAAGAGAGCTCAAGAGGAATTGGAAGCTGTGGTTGGGAAAGACAACATGGTAGAAGAGTCACACATTCATAAGCTGCCCTACTTGAATGCTGTGATGAAAGAAACCCTTCGGTTGCACCCTGTGCTTCCACTCTTAGTCCCTCACTGCCCCAGTGAAACCACCACTNTGGGAGGCTACACAATTCCAAAGGGGTCTAGGGTGTTTGTGAACGTGTGGGCTATCCATAGAGACCCTACCATTTGGGAAAACCCACTGGAATTTGATCCCACAAGGTTCTTGGATGCCAAATGGGATTTCAGTGGGATTGACTTCAATTATTTCCCCTTTGGCTCTGGAAGAAGAATATGTGCTGGAATAGCAATGGCCGAGAGGACGGTTTTGTACTTTCTCGCCACACTTGTGCACTTATTTGATTGGTCGATACCCNAAGGAGAAAAGTTGGAGGTATCAGAGAAATTTGGCATTGTTCTGAAAAAGGAGACCCCTCTGGTTGCCATTCCCACTCCACGACTGTCCAATCCAGATCTTTATAAATAGAATTGAATACAACAATATCCATATATTGATCAAGGGCATCTGTATTCACCAATCACCACTCCACGCCNATAATCATTTGTAATTTATGTATCAGGTATCTTTCCCAGCTTAATCATTCTCTTNCAAATGTTTTAAATGAAATGAAATAATTTATCAACATTTGTAATTTAATGCGTTGAGATAACCAAAATAGCTTCAAGTCCGCAAAAACATTAGCAATGACAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00175	49030	53856	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP706A4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000175s00012035.1	PF00067.17	p450	54	507	1.00E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.858
SRR1783600	control	5.153
SRR1783602	moderate drought stress	6.479
SRR1811619	moderate drought stress	6.656

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.503
DRR006520	Root Summer glycyrrhizin high producing strain	2.483
DRR006521	Root Winter glycyrrhizin high producing strain	26.789
DRR006522	Root Winter glycyrrhizin high producing strain	25.247
DRR006523	Root Summer glycyrrhizin low producing strain	5.858
DRR006524	Root Summer glycyrrhizin low producing strain	5.957
DRR006525	Leaf Summer glycyrrhizin high producing strain	42.892
DRR006526	Leaf Summer glycyrrhizin high producing strain	42.828

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.499
SRR2868004	Drought Stress (root)	25.589
SRR2967015	Control (root)	16.270

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.726
SRR9715740	Leaf	17.145
SRR9715741	Leaf	20.110
SRR9715739	Root	2.901
SRR9715742	Root	4.848
SRR9715743	Root	3.844

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.387
SRR8749028	MeJA induced 9h	0.409
SRR8749029	MeJA induced 9h	0.442
SRR8749030	Uninduced	0.917
SRR8749031	Uninduced	0.582
SRR8749032	Uninduced	0.631

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.785
SRR8400027	Control - Root	7.554