Gene detail information of Glyur000175s00012023 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22740.2 | 5.00E-49 | glycine-rich protein |
| NR | XP_004515767.1 | 8.01E-157 | PREDICTED: uncharacterized protein LOC101499362 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7CFA0|V7CFA0_PHAVU | 2.00E-145 | Uncharacterized protein {ECO:0000313|EMBL:ESW27586.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00175 | 11286 | 14985 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 91.683 |
| SRR1783600 | control | 91.768 |
| SRR1783602 | moderate drought stress | 130.114 |
| SRR1811619 | moderate drought stress | 128.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 146.079 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 145.065 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 192.123 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 188.566 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 223.065 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 223.905 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 106.396 |
| SRR2868004 | Drought Stress (root) | 118.957 |
| SRR2967015 | Control (root) | 112.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 58.714 |
| SRR9715740 | Leaf | 75.138 |
| SRR9715741 | Leaf | 78.716 |
| SRR9715739 | Root | 175.453 |
| SRR9715742 | Root | 134.083 |
| SRR9715743 | Root | 135.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.985 |
| SRR8749028 | MeJA induced 9h | 58.061 |
| SRR8749029 | MeJA induced 9h | 55.500 |
| SRR8749030 | Uninduced | 39.430 |
| SRR8749031 | Uninduced | 23.703 |
| SRR8749032 | Uninduced | 53.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 117.319 |
| SRR8400027 | Control - Root | 112.003 |