Gene detail information of Glyur000174s00018493 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22660.2 | 6.00E-143 | Protein of unknown function (duplicated DUF1399) |
| NR | XP_003519210.1 | 0 | PREDICTED: uncharacterized protein LOC100817275 [Glycine max] |
| COG | YP_003267279.1 | 5.00E-10 | hypothetical protein [Haliangium ochraceum DSM 14365] |
| trEMBL | tr|I1JH29|I1JH29_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G38190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00174 | 247835 | 254065 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000174s00018493.1 | PF07173.7 | DUF1399 | 51 | 199 | 1.70E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.421 |
| SRR1783600 | control | 0.369 |
| SRR1783602 | moderate drought stress | 0.968 |
| SRR1811619 | moderate drought stress | 0.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.051 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.046 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.488 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.355 |
| SRR2868004 | Drought Stress (root) | 16.618 |
| SRR2967015 | Control (root) | 7.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.152 |
| SRR9715740 | Leaf | 3.685 |
| SRR9715741 | Leaf | 23.305 |
| SRR9715739 | Root | 0.468 |
| SRR9715742 | Root | 1.983 |
| SRR9715743 | Root | 1.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.426 |
| SRR8749028 | MeJA induced 9h | 22.244 |
| SRR8749029 | MeJA induced 9h | 20.779 |
| SRR8749030 | Uninduced | 86.738 |
| SRR8749031 | Uninduced | 142.714 |
| SRR8749032 | Uninduced | 59.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.489 |
| SRR8400027 | Control - Root | 4.301 |