Gene detail information of Glyur000173s00011835 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04360.1 | 1.00E-75 | |
| NR | AFK43448.1 | 6.01E-168 | unknown [Lotus japonicus] |
| trEMBL | tr|I3ST56|I3ST56_LOTJA | 2.00E-168 | Uncharacterized protein {ECO:0000313|EMBL:AFK43448.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00173 | 205496 | 208620 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.232 |
| SRR1783600 | control | 4.196 |
| SRR1783602 | moderate drought stress | 4.249 |
| SRR1811619 | moderate drought stress | 4.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.361 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.681 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.877 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.315 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.438 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.276 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.463 |
| SRR2868004 | Drought Stress (root) | 6.787 |
| SRR2967015 | Control (root) | 6.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.244 |
| SRR9715740 | Leaf | 31.456 |
| SRR9715741 | Leaf | 18.850 |
| SRR9715739 | Root | 2.344 |
| SRR9715742 | Root | 4.325 |
| SRR9715743 | Root | 4.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.633 |
| SRR8749028 | MeJA induced 9h | 6.739 |
| SRR8749029 | MeJA induced 9h | 5.416 |
| SRR8749030 | Uninduced | 2.936 |
| SRR8749031 | Uninduced | 0.721 |
| SRR8749032 | Uninduced | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.469 |
| SRR8400027 | Control - Root | 9.585 |