Gene detail information of Glyur000173s00011824 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04220.1 | 5.00E-96 | Plant protein of unknown function (DUF868) |
| NR | XP_004502142.1 | 0 | PREDICTED: uncharacterized protein LOC101513281 [Cicer arietinum] |
| trEMBL | tr|K7N1D0|K7N1D0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G06810.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00173 | 135775 | 136734 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000173s00011824.1 | PF05910.7 | DUF868 | 34 | 317 | 8.20E-95 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.241 |
| SRR1783600 | control | 0.284 |
| SRR1783602 | moderate drought stress | 0.278 |
| SRR1811619 | moderate drought stress | 0.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.224 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.110 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.131 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.401 |
| SRR2868004 | Drought Stress (root) | 0.980 |
| SRR2967015 | Control (root) | 1.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.882 |
| SRR9715740 | Leaf | 0.351 |
| SRR9715741 | Leaf | 0.329 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.429 |
| SRR9715743 | Root | 0.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.276 |
| SRR8749028 | MeJA induced 9h | 3.230 |
| SRR8749029 | MeJA induced 9h | 1.179 |
| SRR8749030 | Uninduced | 13.511 |
| SRR8749031 | Uninduced | 13.391 |
| SRR8749032 | Uninduced | 4.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.066 |
| SRR8400027 | Control - Root | 0.536 |