Gene detail information of Glyur000173s00011808 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02710.1 | 5.00E-32 | ARM repeat superfamily protein |
| NR | XP_004500479.1 | 2.56E-66 | PREDICTED: beta-catenin-like protein 1-like [Cicer arietinum] |
| trEMBL | tr|G7J7W2|G7J7W2_MEDTR | 3.00E-64 | Beta-catenin-like protein {ECO:0000313|EMBL:AES70856.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00173 | 33391 | 34969 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000173s00011808.1 | PF08216.6 | CTNNBL | 26 | 72 | 9.00E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.104 |
| SRR1783600 | control | 0.871 |
| SRR1783602 | moderate drought stress | 3.439 |
| SRR1811619 | moderate drought stress | 3.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.550 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.839 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.623 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.795 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.976 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.916 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.140 |
| SRR2967015 | Control (root) | 0.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.937 |
| SRR9715740 | Leaf | 0.713 |
| SRR9715741 | Leaf | 1.124 |
| SRR9715739 | Root | 1.327 |
| SRR9715742 | Root | 0.940 |
| SRR9715743 | Root | 1.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.334 |
| SRR8749028 | MeJA induced 9h | 0.398 |
| SRR8749029 | MeJA induced 9h | 0.137 |
| SRR8749030 | Uninduced | 0.334 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.085 |
| SRR8400027 | Control - Root | 0.408 |