Gene detail information of Glyur000172s00014912 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05400.2 | 1.00E-63 | copper ion binding |
| NR | XP_003528817.2 | 2.08E-136 | PREDICTED: uncharacterized protein LOC100776061 [Glycine max] |
| trEMBL | tr|K7KZY5|K7KZY5_SOYBN | 8.00E-137 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G06670.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00172 | 236590 | 237477 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.195 |
| SRR1783600 | control | 15.246 |
| SRR1783602 | moderate drought stress | 14.246 |
| SRR1811619 | moderate drought stress | 14.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.130 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.009 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.171 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.982 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.938 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.533 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.017 |
| SRR2868004 | Drought Stress (root) | 18.074 |
| SRR2967015 | Control (root) | 18.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.122 |
| SRR9715740 | Leaf | 9.854 |
| SRR9715741 | Leaf | 8.198 |
| SRR9715739 | Root | 16.715 |
| SRR9715742 | Root | 20.439 |
| SRR9715743 | Root | 17.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.696 |
| SRR8749028 | MeJA induced 9h | 23.358 |
| SRR8749029 | MeJA induced 9h | 18.703 |
| SRR8749030 | Uninduced | 2.026 |
| SRR8749031 | Uninduced | 0.961 |
| SRR8749032 | Uninduced | 0.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.504 |
| SRR8400027 | Control - Root | 21.262 |