Gene detail

Gene detail information of Glyur000172s00014909.2

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G61600.2	POZ/BTB containin G-protein 1
NR	XP_004510713.1	PREDICTED: BTB/POZ domain-containing protein POB1-like [Cicer arietinum]
Swissprot	tr\|Q9FPW6\|POB1_ARATH	BTB/POZ domain-containing protein POB1
trEMBL	tr\|V7ANN5\|V7ANN5_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW07179.1}

Sequence

Transcript Sequence

>Glyur000172s00014909.2
CTGTTACATTACATACATCTGTTCTCTCACCAATAAACCCTCTCTCATTTCTCAACCTAATCGTAGGGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCCTGTGTTGAAGGGAATTTTGTGCTGGGAGTGGAGACATGAAGGAATTGAATTCGGATCTGTTTGACCCGGTTATGGTGATGGAGTCCGAGTGGTCCCGCGGCGNCTCCAATCCCGACGCCGACTTCGCGTTCGCTTTCAACGACAGCAATTTCTCCGATAGGGTTCTCCAAATNGAGATCATGGGCGACCCGGTTGATTCACGACCCGATTCCGAAAACTGCGCAACCGTCGCCGACTGGGTTCGCCACCGTAAGAGGAGACGCGAGGATATCAAAAAGGAAAACGTTGTGGACCTTACTGCGTTGCCCGAGGAGCAAATTCTGAACGAGAACCAACCCGATATGGATGATTGTGTGACCTCTGATAATCAAGATGAAGAGGCTGTTGCAATGGTTGAAGAATCCCCTTCAGGTGATGAAGGTGTGAATAGCAATGATTCGAACCCAAGCATGGATTACTCTGCAGCTGCAGTTGTTAGAGTTAAAACACTGCATATTAGTTCTCCTATCTTGGCTGCAAAAAGTCCTTTCTTCTATAAGCTTTTCTCCAATGGGATGAGGGAATCAGAGCAGAGACATGTCACTCTCAGAATTAATGCCTCTGAAGAAATTGCTCTCATGGAGCTACTGAATTTTATGTACAGTAATACTTTGAGCGTNAAGACAGCACCTGCTTTGCTGGATGTGTTGATGGCTGCTGATAAATTTGAAGTTGCTTCATGCATGAGATATTGTAGCAGGTTACTGCGGAATATGACCATGACACCTGACTCTGCATTGCTTTACCTGGAGNTACCTTCTAGTGTATTAATGGCTGATGCAGTCCAACCATTGACGGATGCGGCAAAGCAGTTCCAGGAAGAAGTTATGGCCTTGCCCCTATCTGGAGTTGAAGCAATATTATCTAGTGATGATCTCCAGGTTGCATCGGAAGATGCTGTATATGACTTTGTGTTGAAGTGGGCTAGACAACAGTACAGCAACCTGGAAGAAAGGCGAGAAGTCTTAGGTGCACGGCTTGCACGTTTAATTCGCTTCCCATACATGACCTGCCGAAAGCTGAAGAAGGTCTTAACCTGTAGTGATTTTGACCATGATGCTGCATCCAAGCTTGTACTTGAGGCCCTATTTTTCAAGGCTGAGGCTCCACATCGCCAACGGTCACTAGCAGCAGAAGAGTCTGCTTCCTCAAACCGTCGTTTTGTGGAGAGGGCATACAAATATCGCCCTGTTAAGGTGGTAGAATTTGAACTTCCCCGGCAGCAGTGTGTGGTGTACTTGGATTTGAAGCGGGAGGAGTGTGCCAATTTGTTCCCTTCTGGTCGGGTATATTCTCAGGCATTCCACTTGGGCGGACAAGGGTTTTTTCTATCAGCACATTGCAACATGGATCAACAGAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAAAAGGGATCGGTGAGCTTCGCTGTGGACTATGAATTTGCTGCAAGGTCTAGACCAACAGATGAGTTTGTTAGCAAATACAAAGGCAATTACACATTCACAGGTGGAAAGGCCGTTGGCTACAGAAACTTGTTTGCGATTCCATGGACTTCATTCATGGCCGAGGATAGTCTTTACTTCATTAATGGTGTTCTTCACCTTAGGGCCGAGCTCACCATCAAACATTGACCCCTATTTCTATTTGTAAACTTTTTATTCCAGTTGGTAGCTCTGACCTATTTTCAGCTGTCGATTTCTCATCTTCTGTTAACCTGTTGTAGTATTTTGTTTAATATCCNAGCAATGTTGCCGTTGTTCAATACCCAGGCAACTTGGACTAGGTGGGCTAGTAGTGTTTGCATGAGATCGAAAGGATGGTTAGAGGACCGTGATTTATTTATCTAGATGACTAGATGATGTTGTTTAGTGTTATCTAGGTTCTTCTATGGACCTGCCTTCCCTTTTAGGACCTGACTAGATGACAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00172	227588	231282	+

Gene family

Gene family	subfamily
Ubiquitin Family	BTB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000172s00014909.2	PF00651.26	BTB	147	239	3.20E-13
Glyur000172s00014909.2	PF07707.10	BACK	274	346	1.50E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	31.353
SRR1783600	control	31.694
SRR1783602	moderate drought stress	32.965
SRR1811619	moderate drought stress	33.100

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	36.884
DRR006520	Root Summer glycyrrhizin high producing strain	36.577
DRR006521	Root Winter glycyrrhizin high producing strain	30.281
DRR006522	Root Winter glycyrrhizin high producing strain	29.576
DRR006523	Root Summer glycyrrhizin low producing strain	31.548
DRR006524	Root Summer glycyrrhizin low producing strain	31.421
DRR006525	Leaf Summer glycyrrhizin high producing strain	30.763
DRR006526	Leaf Summer glycyrrhizin high producing strain	29.584

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	50.640
SRR2868004	Drought Stress (root)	49.588
SRR2967015	Control (root)	46.993

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	30.961
SRR9715740	Leaf	35.424
SRR9715741	Leaf	38.222
SRR9715739	Root	49.655
SRR9715742	Root	42.883
SRR9715743	Root	48.364

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	25.273
SRR8749028	MeJA induced 9h	25.665
SRR8749029	MeJA induced 9h	17.611
SRR8749030	Uninduced	17.913
SRR8749031	Uninduced	14.927
SRR8749032	Uninduced	18.535

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	46.163
SRR8400027	Control - Root	44.955