Gene detail information of Glyur000172s00014908 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41620.1 | 2.00E-84 | |
| NR | XP_003548433.2 | 0 | PREDICTED: uncharacterized protein At5g41620-like [Glycine max] |
| Swissprot | tr|Q66GQ2|Y5162_ARATH | 3.00E-106 | Uncharacterized protein At5g41620 |
| trEMBL | tr|K7MEY4|K7MEY4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G03303.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00172 | 218059 | 222632 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.808 |
| SRR1783600 | control | 4.865 |
| SRR1783602 | moderate drought stress | 6.004 |
| SRR1811619 | moderate drought stress | 6.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.948 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.753 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.856 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.856 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.104 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.259 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.759 |
| SRR2868004 | Drought Stress (root) | 8.747 |
| SRR2967015 | Control (root) | 10.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.877 |
| SRR9715740 | Leaf | 2.777 |
| SRR9715741 | Leaf | 5.572 |
| SRR9715739 | Root | 0.234 |
| SRR9715742 | Root | 2.677 |
| SRR9715743 | Root | 2.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.921 |
| SRR8749028 | MeJA induced 9h | 3.811 |
| SRR8749029 | MeJA induced 9h | 3.082 |
| SRR8749030 | Uninduced | 1.778 |
| SRR8749031 | Uninduced | 2.172 |
| SRR8749032 | Uninduced | 1.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.360 |
| SRR8400027 | Control - Root | 8.589 |