Gene detail

Gene detail information of Glyur000172s00014900

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G46240.1	1.00E-38	BCL-2-associated athanogene 6
NR	KHN27272.1	0	BAG family molecular chaperone regulator 6 [Glycine soja]
Swissprot	tr\|O82345\|BAG6_ARATH	1.00E-56	BAG family molecular chaperone regulator 6
trEMBL	tr\|K7MEY5\|K7MEY5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G03320.2}

Sequence

Transcript Sequence

>Glyur000172s00014900.1
ATCACGACACAGCAGCTTTGATCGCCTGCAACTACAACACACAGCAACACTTTCATTCTATCTTTCCGGGCTGGTGGCTGGGTTTTGCACTGATAACTCCTNATTTGGATAGCGTGGAACCGTTTTGGCTGGTTTTTTCATAAATTGTTGTCTCCTTGAAAATTCTATATATAATAGTTTGTGCTGCAATAACTTTCAAGGTTACTAGGGGACAAGGACTTATCTTGTAAAAATCGTTCTTCTGCCTATTCCTGGTAATCTTACCAAACATGATGCCTACATACAGAAGTATGGACTCATACCCATTTCAAAGAAACCAAACACCGTTTCCTTACTATTATCATCCTGACACTGATGCTGTTCCCCCTCAAATAAGAATGGATCCATCCAAATATGAACAACATTGGCCTCATGCTGGCAGTTATGGGCATATTATACCAACATATTCATGTTGTGGCCACAACAACTTCCCTGGTTACTATGGCTACAGGCCTTCTTATCCTCATGCTCCTGTTCCATCACCAGCGTACTGTTCGGGAGGCTACCCTGCATGCGGCNAACCATTCTTCATTCCTTATCACCCACAACCGCATTATACCATGGAGCTGCCGAGATATGAATATGATAAATATATGTCCAGGGACCATCATTGTTGTGGGTGTCCTAATCATCCATGCAACCAAAAGGAAGGCAAAAGTGTGAAGATTGAAGAGCACAAACCTGATGTTGGAAAGAAAGCGAATGACGCTTCAGTCCCAGCATCGAGGAATTACTATCCATACCCCTTGGTCTGGATTCCATCAGAGTACACAGGTAACAAACAACTGAAGAATCCTGAACAAGACAAGATATCCCATGATAAAACGCCTCATGGCCCTGAGAATTTGAATGCTGATGTGCAACCAGCACAGGAACCAAGAGTCTGGAATGGGTGGTTACCGTTTGATATGAAGGGTGTCCCAAACATGGTCCATGGTGAAGATGGAGTAAGAAGCCAAAACAAGGAAAATGATCATAACAGAAGGGAATCTGAAGATGGAAGAATGAACCAGAAACACCAGAGTGAAGGCAAGATATCCGAGTTCCCATTTCCTATCTTCTGGTGGCCTTACTACAATAAGCAGGAGGAAGGTGGAAGGACAAACAACCAAAACAGCAATTCTACACCAAAATGCATTGAGGAGGTGCCTCATACATTGAAAACTGTTCCAGTAAAATCTTATGTGGATCATGAAGGTGCTACAAATAGTATAAATGCTCCAAATGTTGTAGAGAAAATCACTAATGAAAGAAGCATTCCAGTGAAGCAGATGGAATTGCATCAAAACACAAATGACTCTGAGGGAAGTGAAAAAATTGAGACAAAAAAGGACTCTCACACCAATGGCAAAAGACGATCCACATCTCCACCAAAAGCATCCAAGTTACCTCCCGTTTGTTTGAGAGTTGATCCACCAAGGAAGAAAAATGGCAATGGGAGTTCAAGGTCCCCAAGTCCACCTTCCTTGAAAGAACATTCCCAAGCAACAACCGAGAAAACATCTAAGACTCGTTCGAGTGGCATGAATGACAAGGCCAAGCCAAGTATGAGTCATCAGAATGCTCCAAACACCAGTGAGAGAGTTGCACCTAAGGAGAGAACTATACAGGTATTTGAAAATAAGACTAGTGAAAACAAGGGTGCTGGATGCAGGGATGAATGTCAGATCCAAATAAGTAAGCCCAGTGGTGTTCCAACACGGACAACAGAGAGCGATACATATGGTGACAGAAGTAAGACTGAAGAGAAAAATGCAGAAAAGACTGGAGAAGCCATTGAACAATCCGTGAAGGATACAACTACACCAATTGAGGAAGGTGGTAAAAAAGAAGGAAGAGCTTTGTCAGATGCAGATGCTGCTGTTTTGATACAAGCTGCTTATCATGGTTATCAAGCAAGAAAATGGGAGCCATTGAAGAAATTGAAGCAGATAGCTGAAGTCAGTAAAGAGGTGACTGATGTTAGAGGCCGTATTCAAGCTCTTGAGGATTCTTCTGATCTTCAAAATGATGACAAGCAAAGAATAGCGATTGGAGAGACCATAATGAGACTGCTGCTGAAGTTGGATACTATACAGGGTTTGCACCCAAGTTTCAGGGAGATCAGAAAAACCTTAGCAAAAGAGCTTGTGACCCTACAAGAAAGGCTTGATTCTGTAATGGCTAAGAAACTTCAGCAGCAGATGCAGGAGTTTGATGTTCAGAAACCTGTTGAAGTCACTTCACAGAATACGTTCAACACTTCACAGAATACGCAGGATAGAGAATATCACCCAGAGAAACAAGAAGAAAAAGTGGTTGTACTAGGAGATTCATCTGAAGGCATTAGTGATGGAAGTCATGATACCTTGGAAATATGCCAACTTTGCATGAATGATGGCGACAACAGTCTTCATCCTAAAGATGGTGGAAGTGAATCTCAGTCACCAGATGTTGCAAATGAGGGAATAGATCTTACTGAACTACCAAATGGTAATGAGGACATCAGCCCAATGGTTGCATTTGATGCATTGGATTCTACAGGTAATCTTTCTGAGACAAACAAAACTGCTGTAGAATGTGAAGCCAAAGCAGAGGTAAACAACATTCCCATTGAGGTTGATAAATTGGATGCCAGTGCTTGGAAAGAATTGCCTGTGGGAGTTTGTGATGAAGATGTCATTGATGTTAGTTTTGGAGAAAATACACAAAATGAGAAAAGGATGGAAGAAGCCATGATGGATGATTCTGCACGCGATTCGGTGATCCATGAAATGATGGAGCTGCCGGTGGGATTGCTCGATGAAGATGCGACGACACCTAAATTTGGAGAGGATGAGGGAACTGATATTTCTAATAGGGATGTACAAGATGAAGATGTGGAATCTATCGAGGAACTCCCTATGCGACTGCTTGATGAGGAAACAACAAAATCTGAATTTGAGAAGCATGATGGAACTAATACTTGTAGAGGGGAACTACAAACCGAAAATGAGGAATCTATTGAGGCGCTCCCAGTGGGACTACTTGATGAGTATACAGAAAAATCTGAATTTGAGAAGCTTGGTGATTCTAAGTCTTACAAAGAGGATCAACTAACTGAAGGAGAGGAATATTGTAATGCTAATGAGAGAACATGTTCTTCTACAGATGACCCTGCAAAAAAAACTCAACTAGAGCAGCCACTGCTGGTAGAACAATCAGAGGTGCAGTCTAATGGGGAATCAAATGGATGGGTAAAGATTGAGTTCCAGAAAGAAGATGAACTCAAAGGAGATGGTGCATCACTGGATGTAGATGAGTCAGAAGCGGGAAATAGAAATCAAGGGAATGAAAATGTGGGCTTGGAAGAAGAACCAGAAGACAAGCCTGCACAACAAGAAGCACAAGTTGAAGGTGTTCAAGACATGGTTGGTGGACATGTAATCACTAGTGCTGATGGTAAAGACACAAGAACTTTGGGCAAGGAGGAAAGTCATGAACTCACTGCATTATCATCTCCTCCCTCATTGAAAGATGTGCCCAATATTGTTGAGCATGGTGCAGAGTTGAATGGTGATGTGAAATTATTGGAAGAGAATGAGAAGTTAAGGATGATGATGGACAAGTTGGTTGAAGCTGGGAATGTTCAGTTGAGTGTAATATCAGACCTGACTGGCAGGGTGAAAGACTTGGAGAAGAAACTAGCAAAGACTAGAAGGAGCAAGAGAGTGAGGACAAAGCGGGGTAGACCGTTAACTTCCAAAGAGTATTGCTCCAAATTATCTGAATAACTGATCCATCACGAGTGAGAGTCACTAGTAAAATGCGTATATATATGTAATTGTGTTGTGATATGAGTCCTATAACCTATTGTACTTGTAATATATATTGTGATATAAACATGTG

Protein Sequence

>Glyur000172s00014900.1
MMPTYRSMDSYPFQRNQTPFPYYYHPDTDAVPPQIRMDPSKYEQHWPHAGSYGHIIPTYSCCGHNNFPGYYGYRPSYPHAPVPSPAYCSGGYPACGXPFFIPYHPQPHYTMELPRYEYDKYMSRDHHCCGCPNHPCNQKEGKSVKIEEHKPDVGKKANDASVPASRNYYPYPLVWIPSEYTGNKQLKNPEQDKISHDKTPHGPENLNADVQPAQEPRVWNGWLPFDMKGVPNMVHGEDGVRSQNKENDHNRRESEDGRMNQKHQSEGKISEFPFPIFWWPYYNKQEEGGRTNNQNSNSTPKCIEEVPHTLKTVPVKSYVDHEGATNSINAPNVVEKITNERSIPVKQMELHQNTNDSEGSEKIETKKDSHTNGKRRSTSPPKASKLPPVCLRVDPPRKKNGNGSSRSPSPPSLKEHSQATTEKTSKTRSSGMNDKAKPSMSHQNAPNTSERVAPKERTIQVFENKTSENKGAGCRDECQIQISKPSGVPTRTTESDTYGDRSKTEEKNAEKTGEAIEQSVKDTTTPIEEGGKKEGRALSDADAAVLIQAAYHGYQARKWEPLKKLKQIAEVSKEVTDVRGRIQALEDSSDLQNDDKQRIAIGETIMRLLLKLDTIQGLHPSFREIRKTLAKELVTLQERLDSVMAKKLQQQMQEFDVQKPVEVTSQNTFNTSQNTQDREYHPEKQEEKVVVLGDSSEGISDGSHDTLEICQLCMNDGDNSLHPKDGGSESQSPDVANEGIDLTELPNGNEDISPMVAFDALDSTGNLSETNKTAVECEAKAEVNNIPIEVDKLDASAWKELPVGVCDEDVIDVSFGENTQNEKRMEEAMMDDSARDSVIHEMMELPVGLLDEDATTPKFGEDEGTDISNRDVQDEDVESIEELPMRLLDEETTKSEFEKHDGTNTCRGELQTENEESIEALPVGLLDEYTEKSEFEKLGDSKSYKEDQLTEGEEYCNANERTCSSTDDPAKKTQLEQPLLVEQSEVQSNGESNGWVKIEFQKEDELKGDGASLDVDESEAGNRNQGNENVGLEEEPEDKPAQQEAQVEGVQDMVGGHVITSADGKDTRTLGKEESHELTALSSPPSLKDVPNIVEHGAELNGDVKLLEENEKLRMMMDKLVEAGNVQLSVISDLTGRVKDLEKKLAKTRRSKRVRTKRGRPLTSKEYCSKLSE

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00172	155387	161047	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0051087 chaperone binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000172s00014900.1	PF02179.11	BAG	570	643	5.40E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	83.917
SRR1783600	control	84.278
SRR1783602	moderate drought stress	497.982
SRR1811619	moderate drought stress	496.337

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	42.508
DRR006520	Root Summer glycyrrhizin high producing strain	42.064
DRR006521	Root Winter glycyrrhizin high producing strain	329.746
DRR006522	Root Winter glycyrrhizin high producing strain	320.894
DRR006523	Root Summer glycyrrhizin low producing strain	29.324
DRR006524	Root Summer glycyrrhizin low producing strain	29.220
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.238
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.237

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.648
SRR2868004	Drought Stress (root)	2.551
SRR2967015	Control (root)	1.500

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.580
SRR9715740	Leaf	1.200
SRR9715741	Leaf	0.676
SRR9715739	Root	3.722
SRR9715742	Root	56.493
SRR9715743	Root	50.363

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.377
SRR8749028	MeJA induced 9h	17.916
SRR8749029	MeJA induced 9h	2.145
SRR8749030	Uninduced	3.288
SRR8749031	Uninduced	1.896
SRR8749032	Uninduced	5.667

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	124.262
SRR8400027	Control - Root	127.793