Gene detail information of Glyur000172s00014895 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46225.1 | 3.00E-80 | ABI-1-like 1 |
| NR | XP_004510703.1 | 2.48E-157 | PREDICTED: protein ABIL1-like [Cicer arietinum] |
| Swissprot | tr|Q8S8M5|ABIL1_ARATH | 5.00E-98 | Protein ABIL1 |
| trEMBL | tr|A0A072TMP7|A0A072TMP7_MEDTR | 2.00E-154 | ABIL1-like protein {ECO:0000313|EMBL:KEH18769.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00172 | 124388 | 127699 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.058 |
| SRR1783600 | control | 7.123 |
| SRR1783602 | moderate drought stress | 5.044 |
| SRR1811619 | moderate drought stress | 5.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.958 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.360 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.019 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.473 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.218 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.106 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.444 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.820 |
| SRR2868004 | Drought Stress (root) | 10.782 |
| SRR2967015 | Control (root) | 7.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.423 |
| SRR9715740 | Leaf | 4.584 |
| SRR9715741 | Leaf | 6.145 |
| SRR9715739 | Root | 2.090 |
| SRR9715742 | Root | 6.055 |
| SRR9715743 | Root | 6.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.514 |
| SRR8749028 | MeJA induced 9h | 2.129 |
| SRR8749029 | MeJA induced 9h | 1.054 |
| SRR8749030 | Uninduced | 0.746 |
| SRR8749031 | Uninduced | 0.243 |
| SRR8749032 | Uninduced | 0.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.009 |
| SRR8400027 | Control - Root | 14.246 |