Gene detail information of Glyur000171s00016613 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80160.1 | 6.00E-71 | Lactoylglutathione lyase / glyoxalase I family protein |
| NR | XP_002517606.1 | 5.35E-98 | lactoylglutathione lyase, putative [Ricinus communis] |
| COG | YP_004537359.1 | 5.00E-15 | glyoxalase/bleomycin resistance protein/dioxygenase [Thioalkalimicrobium cyclicum ALM1] |
| trEMBL | tr|B9RV37|B9RV37_RICCO | 2.00E-98 | Lactoylglutathione lyase, putative {ECO:0000313|EMBL:EEF44770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00171 | 119718 | 121598 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000171s00016613.1 | PF12681.2 | Glyoxalase_2 | 19 | 132 | 8.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.313 |
| SRR1783600 | control | 1.152 |
| SRR1783602 | moderate drought stress | 0.114 |
| SRR1811619 | moderate drought stress | 0.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.982 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.420 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.480 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.736 |
| SRR2868004 | Drought Stress (root) | 41.665 |
| SRR2967015 | Control (root) | 55.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.342 |
| SRR9715740 | Leaf | 0.124 |
| SRR9715741 | Leaf | 1.236 |
| SRR9715739 | Root | 0.543 |
| SRR9715742 | Root | 0.271 |
| SRR9715743 | Root | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.148 |
| SRR8749028 | MeJA induced 9h | 2.543 |
| SRR8749029 | MeJA induced 9h | 1.125 |
| SRR8749030 | Uninduced | 9.596 |
| SRR8749031 | Uninduced | 41.185 |
| SRR8749032 | Uninduced | 46.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.543 |
| SRR8400027 | Control - Root | 7.620 |