Gene detail information of Glyur000171s00016611 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003597867.1 | 1.88E-22 | hypothetical protein MTR_2g103440 [Medicago truncatula] |
| trEMBL | tr|Q2HVV6|Q2HVV6_MEDTR | 7.00E-23 | DUF761 domain protein {ECO:0000313|EMBL:AES68118.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00171 | 106912 | 107232 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000171s00016611.1 | PF05553.6 | DUF761 | 70 | 105 | 3.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.052 |
| SRR1783600 | control | 5.488 |
| SRR1783602 | moderate drought stress | 6.461 |
| SRR1811619 | moderate drought stress | 5.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.107 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.381 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.688 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.671 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.371 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.602 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.274 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.105 |
| SRR2868004 | Drought Stress (root) | 28.706 |
| SRR2967015 | Control (root) | 26.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.189 |
| SRR9715740 | Leaf | 0.253 |
| SRR9715741 | Leaf | 0.370 |
| SRR9715739 | Root | 0.154 |
| SRR9715742 | Root | 1.691 |
| SRR9715743 | Root | 1.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.188 |
| SRR8749028 | MeJA induced 9h | 2.713 |
| SRR8749029 | MeJA induced 9h | 4.794 |
| SRR8749030 | Uninduced | 0.099 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.612 |
| SRR8400027 | Control - Root | 8.131 |