Gene detail information of Glyur000171s00016600 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15690.2 | 5.00E-32 | Single hybrid motif superfamily protein |
| NR | XP_003543673.1 | 1.17E-115 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic-like [Glycine max] |
| trEMBL | tr|I1M5S0|I1M5S0_SOYBN | 4.00E-116 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G44040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00171 | 49829 | 54495 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.870 |
| SRR1783600 | control | 9.802 |
| SRR1783602 | moderate drought stress | 9.248 |
| SRR1811619 | moderate drought stress | 9.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.692 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.192 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.881 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.750 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.562 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.833 |
| SRR2868004 | Drought Stress (root) | 4.612 |
| SRR2967015 | Control (root) | 4.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.740 |
| SRR9715740 | Leaf | 40.729 |
| SRR9715741 | Leaf | 32.361 |
| SRR9715739 | Root | 2.018 |
| SRR9715742 | Root | 4.831 |
| SRR9715743 | Root | 3.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.372 |
| SRR8749028 | MeJA induced 9h | 3.165 |
| SRR8749029 | MeJA induced 9h | 2.456 |
| SRR8749030 | Uninduced | 2.806 |
| SRR8749031 | Uninduced | 1.063 |
| SRR8749032 | Uninduced | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.254 |
| SRR8400027 | Control - Root | 10.834 |