Gene detail information of Glyur000170s00011021 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11780.1 | 6.00E-54 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein |
| NR | NP_001236775.1 | 1.63E-79 | uncharacterized protein LOC100306050 precursor [Glycine max] |
| trEMBL | tr|C6SXR8|C6SXR8_SOYBN | 6.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G10310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00170 | 208173 | 210020 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000170s00011021.1 | PF02221.10 | E1_DerP2_DerF2 | 28 | 146 | 2.50E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.186 |
| SRR1783600 | control | 0.193 |
| SRR1783602 | moderate drought stress | 0.816 |
| SRR1811619 | moderate drought stress | 0.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.701 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.819 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.194 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.045 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.867 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.982 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.895 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.009 |
| SRR2868004 | Drought Stress (root) | 2.543 |
| SRR2967015 | Control (root) | 4.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 89.013 |
| SRR9715740 | Leaf | 62.554 |
| SRR9715741 | Leaf | 47.580 |
| SRR9715739 | Root | 0.294 |
| SRR9715742 | Root | 0.465 |
| SRR9715743 | Root | 0.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.276 |
| SRR8749028 | MeJA induced 9h | 0.218 |
| SRR8749029 | MeJA induced 9h | 0.262 |
| SRR8749030 | Uninduced | 1.077 |
| SRR8749031 | Uninduced | 0.537 |
| SRR8749032 | Uninduced | 0.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.351 |
| SRR8400027 | Control - Root | 2.230 |