Gene detail information of Glyur000170s00011020 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06470.1 | 4.00E-41 | Glutaredoxin family protein |
| NR | KEH24258.1 | 8.96E-110 | glutaredoxin (GRX) family protein [Medicago truncatula] |
| Swissprot | tr|Q9FLE8|Y5986_ARATH | 6.00E-28 | Uncharacterized protein At5g39865 |
| trEMBL | tr|A0A072U534|A0A072U534_MEDTR | 3.00E-110 | Glutaredoxin (GRX) family protein {ECO:0000313|EMBL:KEH24258.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00170 | 205375 | 206844 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000170s00011020.1 | PF00462.19 | Glutaredoxin | 136 | 201 | 1.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.220 |
| SRR1783600 | control | 3.180 |
| SRR1783602 | moderate drought stress | 2.601 |
| SRR1811619 | moderate drought stress | 2.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.811 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.560 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.221 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.757 |
| SRR2868004 | Drought Stress (root) | 15.116 |
| SRR2967015 | Control (root) | 16.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.029 |
| SRR9715740 | Leaf | 1.765 |
| SRR9715741 | Leaf | 2.845 |
| SRR9715739 | Root | 2.433 |
| SRR9715742 | Root | 3.221 |
| SRR9715743 | Root | 1.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.006 |
| SRR8749028 | MeJA induced 9h | 0.143 |
| SRR8749029 | MeJA induced 9h | 0.148 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.544 |
| SRR8749032 | Uninduced | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.346 |
| SRR8400027 | Control - Root | 23.164 |