Gene detail information of Glyur000170s00011019 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11760.1 | 0 | |
| NR | XP_006604663.1 | 0 | PREDICTED: uncharacterized protein LOC100815920 [Glycine max] |
| trEMBL | tr|I1NAV7|I1NAV7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G38830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00170 | 198553 | 202477 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000170s00011019.1 | PF10358.4 | NT-C2 | 17 | 176 | 1.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.745 |
| SRR1783600 | control | 6.897 |
| SRR1783602 | moderate drought stress | 6.969 |
| SRR1811619 | moderate drought stress | 6.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.864 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.796 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.225 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.078 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.161 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.406 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.360 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.797 |
| SRR2868004 | Drought Stress (root) | 12.939 |
| SRR2967015 | Control (root) | 13.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.670 |
| SRR9715740 | Leaf | 38.306 |
| SRR9715741 | Leaf | 47.483 |
| SRR9715739 | Root | 61.269 |
| SRR9715742 | Root | 91.640 |
| SRR9715743 | Root | 88.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.095 |
| SRR8749028 | MeJA induced 9h | 58.491 |
| SRR8749029 | MeJA induced 9h | 33.734 |
| SRR8749030 | Uninduced | 59.857 |
| SRR8749031 | Uninduced | 60.266 |
| SRR8749032 | Uninduced | 26.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.208 |
| SRR8400027 | Control - Root | 31.468 |