Gene detail information of Glyur000170s00011000 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54750.2 | 4.00E-130 | |
| NR | KHN43590.1 | 0 | Protein downstream neighbor of Son [Glycine soja] |
| trEMBL | tr|I1NAX1|I1NAX1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G38990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00170 | 80688 | 88994 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.703 |
| SRR1783600 | control | 6.620 |
| SRR1783602 | moderate drought stress | 5.524 |
| SRR1811619 | moderate drought stress | 5.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.199 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.004 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.917 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.448 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.537 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.178 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.738 |
| SRR2868004 | Drought Stress (root) | 14.084 |
| SRR2967015 | Control (root) | 12.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.201 |
| SRR9715740 | Leaf | 1.736 |
| SRR9715741 | Leaf | 1.146 |
| SRR9715739 | Root | 3.433 |
| SRR9715742 | Root | 4.333 |
| SRR9715743 | Root | 3.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.001 |
| SRR8749028 | MeJA induced 9h | 12.341 |
| SRR8749029 | MeJA induced 9h | 11.295 |
| SRR8749030 | Uninduced | 2.783 |
| SRR8749031 | Uninduced | 1.324 |
| SRR8749032 | Uninduced | 2.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.717 |
| SRR8400027 | Control - Root | 11.045 |