Gene detail information of Glyur000170s00010986 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06590.1 | 2.00E-58 | |
| NR | XP_003554492.2 | 1.60E-164 | PREDICTED: spindle and kinetochore-associated protein 3 [Glycine max] |
| trEMBL | tr|I1NAY4|I1NAY4_SOYBN | 3.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39090.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00170 | 14152 | 16232 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.529 |
| SRR1783600 | control | 1.571 |
| SRR1783602 | moderate drought stress | 1.730 |
| SRR1811619 | moderate drought stress | 1.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.234 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.492 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.091 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.084 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.911 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.793 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.338 |
| SRR2868004 | Drought Stress (root) | 4.500 |
| SRR2967015 | Control (root) | 4.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.356 |
| SRR9715740 | Leaf | 0.120 |
| SRR9715741 | Leaf | 0.615 |
| SRR9715739 | Root | 0.313 |
| SRR9715742 | Root | 0.183 |
| SRR9715743 | Root | 0.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.449 |
| SRR8749028 | MeJA induced 9h | 4.984 |
| SRR8749029 | MeJA induced 9h | 4.745 |
| SRR8749030 | Uninduced | 0.697 |
| SRR8749031 | Uninduced | 0.397 |
| SRR8749032 | Uninduced | 0.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.132 |
| SRR8400027 | Control - Root | 3.960 |