Gene detail information of Glyur000169s00018364 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G20030.1 | 6.00E-04 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| NR | KHN28934.1 | 1.92E-17 | Multiple RNA-binding domain-containing protein 1 [Glycine soja] |
| trEMBL | tr|C6SXE6|C6SXE6_SOYBN | 8.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G09290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00169 | 124526 | 125919 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.509 |
| SRR1783600 | control | 11.997 |
| SRR1783602 | moderate drought stress | 8.836 |
| SRR1811619 | moderate drought stress | 13.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.082 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.034 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.922 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.595 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.768 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.759 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.181 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.470 |
| SRR2868004 | Drought Stress (root) | 2.047 |
| SRR2967015 | Control (root) | 2.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.037 |
| SRR9715740 | Leaf | 6.088 |
| SRR9715741 | Leaf | 3.492 |
| SRR9715739 | Root | 0.862 |
| SRR9715742 | Root | 1.876 |
| SRR9715743 | Root | 1.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.209 |
| SRR8749028 | MeJA induced 9h | 1.469 |
| SRR8749029 | MeJA induced 9h | 3.080 |
| SRR8749030 | Uninduced | 3.092 |
| SRR8749031 | Uninduced | 4.906 |
| SRR8749032 | Uninduced | 3.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.754 |
| SRR8400027 | Control - Root | 2.611 |