Gene detail information of Glyur000168s00018584 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07090.1 | 2.00E-72 | PPPDE putative thiol peptidase family protein |
| NR | NP_001241245.1 | 2.26E-116 | uncharacterized protein LOC100799161 [Glycine max] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 4.00E-12 | DeSI-like protein At4g17486 |
| trEMBL | tr|C6THR3|C6THR3_SOYBN | 8.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G36840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00168 | 270408 | 273458 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000168s00018584.1 | PF05903.9 | Peptidase_C97 | 7 | 147 | 3.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.244 |
| SRR1783600 | control | 2.255 |
| SRR1783602 | moderate drought stress | 0.380 |
| SRR1811619 | moderate drought stress | 0.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.499 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.788 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.560 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.318 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.914 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.453 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.826 |
| SRR2868004 | Drought Stress (root) | 2.475 |
| SRR2967015 | Control (root) | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.934 |
| SRR9715740 | Leaf | 14.626 |
| SRR9715741 | Leaf | 22.692 |
| SRR9715739 | Root | 5.254 |
| SRR9715742 | Root | 8.912 |
| SRR9715743 | Root | 7.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.361 |
| SRR8749028 | MeJA induced 9h | 1.048 |
| SRR8749029 | MeJA induced 9h | 1.271 |
| SRR8749030 | Uninduced | 2.631 |
| SRR8749031 | Uninduced | 0.582 |
| SRR8749032 | Uninduced | 0.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.826 |
| SRR8400027 | Control - Root | 1.197 |