Gene detail information of Glyur000168s00018552 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52060.1 | 8.00E-86 | BCL-2-associated athanogene 1 |
| NR | XP_007152341.1 | 0 | hypothetical protein PHAVU_004G121800g [Phaseolus vulgaris] |
| Swissprot | tr|Q0WUQ1|BAG1_ARATH | 4.00E-111 | BAG family molecular chaperone regulator 1 |
| trEMBL | tr|V7C4X6|V7C4X6_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW24335.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00168 | 15763 | 18382 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000168s00018552.1 | PF02179.11 | BAG | 157 | 241 | 1.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.460 |
| SRR1783600 | control | 28.572 |
| SRR1783602 | moderate drought stress | 25.053 |
| SRR1811619 | moderate drought stress | 24.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.917 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.729 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.907 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.862 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.846 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.290 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.326 |
| SRR2868004 | Drought Stress (root) | 57.544 |
| SRR2967015 | Control (root) | 47.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.361 |
| SRR9715740 | Leaf | 43.521 |
| SRR9715741 | Leaf | 28.730 |
| SRR9715739 | Root | 4.226 |
| SRR9715742 | Root | 23.872 |
| SRR9715743 | Root | 19.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.106 |
| SRR8749028 | MeJA induced 9h | 47.153 |
| SRR8749029 | MeJA induced 9h | 40.578 |
| SRR8749030 | Uninduced | 52.596 |
| SRR8749031 | Uninduced | 52.173 |
| SRR8749032 | Uninduced | 32.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.233 |
| SRR8400027 | Control - Root | 86.427 |