Gene detail information of Glyur000167s00012286 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006592024.1 | 0 | PREDICTED: uncharacterized protein LOC100789708 [Glycine max] |
| COG | YP_003798563.1 | 3.00E-10 | hypothetical protein NIDE2940 [Candidatus Nitrospira defluvii] |
| trEMBL | tr|K7LSK9|K7LSK9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02355.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00167 | 213208 | 219713 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.655 |
| SRR1783600 | control | 2.565 |
| SRR1783602 | moderate drought stress | 2.177 |
| SRR1811619 | moderate drought stress | 2.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.500 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.407 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.092 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.067 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.329 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.193 |
| SRR2868004 | Drought Stress (root) | 19.375 |
| SRR2967015 | Control (root) | 14.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.990 |
| SRR9715740 | Leaf | 20.631 |
| SRR9715741 | Leaf | 28.568 |
| SRR9715739 | Root | 0.319 |
| SRR9715742 | Root | 2.018 |
| SRR9715743 | Root | 1.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.149 |
| SRR8749028 | MeJA induced 9h | 0.180 |
| SRR8749029 | MeJA induced 9h | 0.023 |
| SRR8749030 | Uninduced | 2.876 |
| SRR8749031 | Uninduced | 5.064 |
| SRR8749032 | Uninduced | 0.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.591 |
| SRR8400027 | Control - Root | 10.155 |