Gene detail information of Glyur000167s00012260 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22210.1 | 3.00E-15 | |
| NR | XP_010093138.1 | 5.79E-30 | hypothetical protein L484_009330 [Morus notabilis] |
| trEMBL | tr|W9R0M3|W9R0M3_9ROSA | 2.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:EXB53590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00167 | 22118 | 22971 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.232 |
| SRR1783600 | control | 0.287 |
| SRR1783602 | moderate drought stress | 1.063 |
| SRR1811619 | moderate drought stress | 1.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.288 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.281 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.714 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.572 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.697 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.138 |
| SRR2868004 | Drought Stress (root) | 3.046 |
| SRR2967015 | Control (root) | 3.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.267 |
| SRR9715740 | Leaf | 17.236 |
| SRR9715741 | Leaf | 5.097 |
| SRR9715739 | Root | 0.191 |
| SRR9715742 | Root | 0.080 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.137 |
| SRR8749028 | MeJA induced 9h | 3.920 |
| SRR8749029 | MeJA induced 9h | 2.748 |
| SRR8749030 | Uninduced | 2.606 |
| SRR8749031 | Uninduced | 1.481 |
| SRR8749032 | Uninduced | 0.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.654 |
| SRR8400027 | Control - Root | 2.140 |