Gene detail information of Glyur000167s00012258 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32240.1 | 0 | |
| NR | XP_006592033.1 | 0 | PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503-like isoform X1 [Glycine max] |
| trEMBL | tr|K7LSM2|K7LSM2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02520.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00167 | 3049 | 26739 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.421 |
| SRR1783600 | control | 37.244 |
| SRR1783602 | moderate drought stress | 32.824 |
| SRR1811619 | moderate drought stress | 32.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 63.328 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.847 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.500 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.711 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 53.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.816 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.394 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.574 |
| SRR2868004 | Drought Stress (root) | 43.183 |
| SRR2967015 | Control (root) | 42.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.567 |
| SRR9715740 | Leaf | 16.257 |
| SRR9715741 | Leaf | 14.086 |
| SRR9715739 | Root | 5.319 |
| SRR9715742 | Root | 7.211 |
| SRR9715743 | Root | 7.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.555 |
| SRR8749028 | MeJA induced 9h | 42.575 |
| SRR8749029 | MeJA induced 9h | 27.371 |
| SRR8749030 | Uninduced | 30.915 |
| SRR8749031 | Uninduced | 53.759 |
| SRR8749032 | Uninduced | 31.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.302 |
| SRR8400027 | Control - Root | 45.551 |