Gene detail information of Glyur000166s00010607 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13260.1 | 1.00E-126 | |
| NR | XP_004497431.1 | 0 | PREDICTED: uncharacterized protein LOC101507286 isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8RWD5|SCD2_ARATH | 1.00E-140 | Coiled-coil domain-containing protein SCD2 {ECO:0000305} |
| trEMBL | tr|K7N5K3|K7N5K3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G39460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00166 | 282380 | 290479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.943 |
| SRR1783600 | control | 34.870 |
| SRR1783602 | moderate drought stress | 24.637 |
| SRR1811619 | moderate drought stress | 24.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.206 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.304 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.577 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.560 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.354 |
| SRR2868004 | Drought Stress (root) | 23.437 |
| SRR2967015 | Control (root) | 29.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.247 |
| SRR9715740 | Leaf | 16.088 |
| SRR9715741 | Leaf | 12.642 |
| SRR9715739 | Root | 7.781 |
| SRR9715742 | Root | 28.056 |
| SRR9715743 | Root | 23.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.863 |
| SRR8749028 | MeJA induced 9h | 12.826 |
| SRR8749029 | MeJA induced 9h | 8.849 |
| SRR8749030 | Uninduced | 4.242 |
| SRR8749031 | Uninduced | 1.953 |
| SRR8749032 | Uninduced | 3.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.773 |
| SRR8400027 | Control - Root | 71.701 |