Gene detail information of Glyur000166s00010600 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28140.1 | 5.00E-81 | |
| NR | XP_003592175.1 | 4.55E-150 | hypothetical protein MTR_1g099520 [Medicago truncatula] |
| COG | NP_440570.1 | 4.00E-36 | hypothetical protein sll1925 [Synechocystis sp. PCC 6803] |
| trEMBL | tr|G7IDX3|G7IDX3_MEDTR | 2.00E-150 | Integral membrane protein {ECO:0000313|EMBL:AES62426.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00166 | 249328 | 252076 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000166s00010600.1 | PF10063.4 | DUF2301 | 143 | 281 | 1.90E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.034 |
| SRR1783600 | control | 18.092 |
| SRR1783602 | moderate drought stress | 12.627 |
| SRR1811619 | moderate drought stress | 12.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.180 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.046 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.250 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.429 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.902 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.515 |
| SRR2868004 | Drought Stress (root) | 22.538 |
| SRR2967015 | Control (root) | 19.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.003 |
| SRR9715740 | Leaf | 59.608 |
| SRR9715741 | Leaf | 60.372 |
| SRR9715739 | Root | 14.767 |
| SRR9715742 | Root | 19.925 |
| SRR9715743 | Root | 15.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.172 |
| SRR8749028 | MeJA induced 9h | 11.536 |
| SRR8749029 | MeJA induced 9h | 10.179 |
| SRR8749030 | Uninduced | 17.372 |
| SRR8749031 | Uninduced | 13.351 |
| SRR8749032 | Uninduced | 11.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.203 |
| SRR8400027 | Control - Root | 43.077 |