Gene detail information of Glyur000166s00010593 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006605306.1 | 0 | PREDICTED: uncharacterized protein LOC100500128 isoform X1 [Glycine max] |
| COG | YP_005269971.1 | 9.00E-162 | putative amidohydrolase [Acetobacterium woodii DSM 1030] |
| trEMBL | tr|I1NJF1|I1NJF1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G39350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00166 | 207622 | 212700 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000166s00010593.1 | PF01979.15 | Amidohydro_1 | 84 | 412 | 6.70E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.391 |
| SRR1783600 | control | 6.286 |
| SRR1783602 | moderate drought stress | 5.620 |
| SRR1811619 | moderate drought stress | 5.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.571 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.447 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.957 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.952 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.896 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.761 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.949 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.751 |
| SRR2868004 | Drought Stress (root) | 16.299 |
| SRR2967015 | Control (root) | 15.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.616 |
| SRR9715740 | Leaf | 16.453 |
| SRR9715741 | Leaf | 10.644 |
| SRR9715739 | Root | 3.541 |
| SRR9715742 | Root | 1.340 |
| SRR9715743 | Root | 1.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.995 |
| SRR8749028 | MeJA induced 9h | 12.217 |
| SRR8749029 | MeJA induced 9h | 9.089 |
| SRR8749030 | Uninduced | 6.926 |
| SRR8749031 | Uninduced | 7.030 |
| SRR8749032 | Uninduced | 5.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.339 |
| SRR8400027 | Control - Root | 9.118 |