Gene detail information of Glyur000166s00010572 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05790.1 | 9.00E-161 | lipase class 3 family protein |
| NR | AES63099.2 | 0 | sn1-specific diacylglycerol lipase beta-like protein [Medicago truncatula] |
| trEMBL | tr|G7IB13|G7IB13_MEDTR | 0 | Sn1-specific diacylglycerol lipase beta-like protein {ECO:0000313|EMBL:AES63099.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00166 | 78987 | 87994 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000166s00010572.1 | PF01764.20 | Lipase_3 | 421 | 471 | 3.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.703 |
| SRR1783600 | control | 7.643 |
| SRR1783602 | moderate drought stress | 7.469 |
| SRR1811619 | moderate drought stress | 7.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.438 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.845 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.767 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.757 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.814 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.178 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.201 |
| SRR2868004 | Drought Stress (root) | 12.742 |
| SRR2967015 | Control (root) | 10.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.102 |
| SRR9715740 | Leaf | 1.969 |
| SRR9715741 | Leaf | 1.740 |
| SRR9715739 | Root | 2.743 |
| SRR9715742 | Root | 5.370 |
| SRR9715743 | Root | 4.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.897 |
| SRR8749028 | MeJA induced 9h | 10.521 |
| SRR8749029 | MeJA induced 9h | 7.338 |
| SRR8749030 | Uninduced | 13.669 |
| SRR8749031 | Uninduced | 20.560 |
| SRR8749032 | Uninduced | 17.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.060 |
| SRR8400027 | Control - Root | 14.979 |