Gene detail information of Glyur000166s00010569 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH40672.1 | 4.14E-06 | neurofilament heavy protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VFT3|A0A072VFT3_MEDTR | 2.00E-06 | Neurofilament heavy protein, putative {ECO:0000313|EMBL:KEH40672.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00166 | 58764 | 59348 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15985.817 |
| SRR1783600 | control | 15925.096 |
| SRR1783602 | moderate drought stress | 15851.078 |
| SRR1811619 | moderate drought stress | 16396.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3423.329 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3178.254 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.361 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1739.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1685.444 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 883.428 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 856.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2932.013 |
| SRR2868004 | Drought Stress (root) | 2739.055 |
| SRR2967015 | Control (root) | 1917.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 233.787 |
| SRR9715740 | Leaf | 19.768 |
| SRR9715741 | Leaf | 52.898 |
| SRR9715739 | Root | 565.076 |
| SRR9715742 | Root | 1303.715 |
| SRR9715743 | Root | 1173.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 839.348 |
| SRR8749028 | MeJA induced 9h | 1237.925 |
| SRR8749029 | MeJA induced 9h | 1145.445 |
| SRR8749030 | Uninduced | 1394.526 |
| SRR8749031 | Uninduced | 532.304 |
| SRR8749032 | Uninduced | 2781.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 847.447 |
| SRR8400027 | Control - Root | 809.995 |