Gene detail

Gene detail information of Glyur000166s00010566

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G01900.1	4.00E-154	DNAse I-like superfamily protein
NR	XP_004498104.1	0	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Cicer arietinum]
Swissprot	tr\|Q9LR47\|IP5P3_ARATH	8.00E-85	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
trEMBL	tr\|G7IBG6\|G7IBG6_MEDTR	0	Type I inositol-1,4,5-trisphosphate 5-phosphatase {ECO:0000313\|EMBL:AES60000.1}

Sequence

Transcript Sequence

>Glyur000166s00010566.1
ATGCCTGGAAAGCTAGCAGAAGTCATGTGGCCTGCATTAGTGGCTAATAAGNTACTCAACAAGAGACTTGGGAGCAGTAATTTCATAGCAGATTATCCAAGTCACACAGATCCTTTATTGGGTATTACTACAAGTGATGATCAGTTACCTGTTCTTAATGATCACAGTACTGATACACAAAAGTACAAGGTTTTTGTGAGTACATGGAACGTAGGTGGGATTGCACCAGAGGAAGGATTAAACATGGAGGATTTGTTAGAGACATGCAGCAAGTCCTTTGACATCTATGTACTTGGGTTTCAAGAAGTTGTGCCTCTGAAAGCATCAAGTGTGTTGGGATTAGAGAATAGTAAGATTTCAACTAAATGGAACTCCCTAATCAGAGAAGCCTTGAACAAGAAGAAGGGGACAACACAGAACCAGTACTATTGCAAAGATCTGAAGGGAAATATCTGTCCCATCAATAAAAAGGAAGGAATTAATCCAGCTCAGCAAAATAAAGCCCCACAAGATTTTCATTGTATCATTAGCAAGCAAATGGTTGGTATAATGATATCTGTGTGGGTTAGGAGTGAGCTTAGACCATTCATTAGGCATCCAAGTGTCTCATGTGTGGGTTGTGGCATCATGGGCTGCTTAGGGAACAAGGGTTCTGTATCTGTGAGATTTCTGTTACATGAAACAAGCTTTTGCTTTGTGTGTAGTCATCTGGCTTCTGGTGGAAGAGAAGGGGATGAGAAGCATAGGAACTCTGATGTTGCTGAAATATTCTCAAGGACAAGCTTTCCTAGAGGACCTATGCTAGATTTGCCAAGAAAGATTCTTGATCATGACCATGTAATATTGCTTGGAGATTTAAATTACAGAGTTTCTCTACCGGAAGAAACCACACGCTTACTTATTGAAAGAAGAGACTGGAACTCCCTACTAGAAAATGATCAGCTAAAGATGGAGCTAGTGAGTGGAAACANGTTAAGAGGATGGCATGAAGGAGCAATCAAATTCGCCCCAACCTACAAGTATTTTCCAAATTCAGACTTGTACTATGGATGTTGTTATCATGGGCATAAAAAGGCACCAAAGAGAAGATCCCCAGCATGGTGTGACAGAATTATATGGTTTGGGAAGGGTTTAAAGCAAACTCAGTATACTAGAAGTGAATCAAAATTATCAGACCACAGGCCTGTTAAGGCATTGTTTACAGCAGAAGTCAGTGTTTCAGCAGCACTGGAAAACTTAACAACAAGGTTNTTTCTGTCAGAGAGATTTGGACAAATTAAGACACACTTCGAAGTTTCACCCACTCATGAGTTTATATGTAACAAACAATCAAGTTTCCGGTTTACTGTGCTTATGTACATAACATGGTCAGCTTTACATCTGAAAAACTATAGAAGTATAAAAGAAGAAAATCATAAGGAAATTGAGAAACTTCTAGCAGATGACAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00166	41249	45105	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0046856 phosphatidylinositol dephosphorylation

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000166s00010566.1	PF03372.18	Exo_endo_phos	68	393	7.30E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.271
SRR1783600	control	0.311
SRR1783602	moderate drought stress	0.043
SRR1811619	moderate drought stress	0.035

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	57.238
SRR2868004	Drought Stress (root)	63.461
SRR2967015	Control (root)	75.242

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.002
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.001
SRR9715742	Root	0.003
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.005
SRR8749028	MeJA induced 9h	0.003
SRR8749029	MeJA induced 9h	0.003
SRR8749030	Uninduced	0.005
SRR8749031	Uninduced	0.003
SRR8749032	Uninduced	0.003

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.101
SRR8400027	Control - Root	12.952