Gene detail information of Glyur000165s00008530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35320.1 | 6.00E-09 | |
| NR | KHM99851.1 | 5.18E-66 | hypothetical protein glysoja_017549 [Glycine soja] |
| trEMBL | tr|G7LIX0|G7LIX0_MEDTR | 1.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:AET05098.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00165 | 285161 | 286812 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.575 |
| SRR1783600 | control | 7.669 |
| SRR1783602 | moderate drought stress | 18.361 |
| SRR1811619 | moderate drought stress | 18.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.034 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.928 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.641 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.493 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.705 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.445 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.775 |
| SRR2868004 | Drought Stress (root) | 9.182 |
| SRR2967015 | Control (root) | 5.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.035 |
| SRR9715740 | Leaf | 2.261 |
| SRR9715741 | Leaf | 4.226 |
| SRR9715739 | Root | 1.751 |
| SRR9715742 | Root | 6.352 |
| SRR9715743 | Root | 5.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.539 |
| SRR8749028 | MeJA induced 9h | 16.925 |
| SRR8749029 | MeJA induced 9h | 5.726 |
| SRR8749030 | Uninduced | 3.409 |
| SRR8749031 | Uninduced | 2.324 |
| SRR8749032 | Uninduced | 7.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.709 |
| SRR8400027 | Control - Root | 10.079 |