Gene detail

Gene detail information of Glyur000165s00008500

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G53390.1	5.00E-59	O-acyltransferase (WSD1-like) family protein
NR	XP_004511283.1	0	PREDICTED: O-acyltransferase WSD1-like [Cicer arietinum]
COG	YP_003951335.1	7.00E-20	hypothetical protein STAUR_1704 [Stigmatella aurantiaca DW4/3-1]
Swissprot	tr\|Q93ZR6\|WSD1_ARATH	3.00E-55	O-acyltransferase WSD1
trEMBL	tr\|I1KG13\|I1KG13_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G00220.1}

Sequence

Transcript Sequence

>Glyur000165s00008500.1
ATGAACCAGATAATCCACTGCGTGATAGGGCTGAAGAACCCCATCGATGTGGAGTCAGTAAAATCCGAAATCCGNAACTCCATAATGCTGCAACACCCAAGGTTCGGGAGCCTGATGGTACGCGACCATCGAGGCGTGGAGCACTGGCGCCCCACCCAAATCGACATCAACAGCCACCTCCGGGTCATCGAGGAGCCAATAACCGAGTCATCGGAGGATCATGAATCGGCCATCAACGAGTACATGGGGGATTTATGCACCACATCCGCATCGGGACTGAGTATGGATAAGCCCCTGTGGGAGATCCATGTCCTGAGGGCCCACAAGTGCGTCATATTTCGAATCCATCACTCCCTCGGGGACGGGATTTCGTTGATGTCCATGCTACTCGCCAGNTGCAGGCAGGTCCATGACCCCCACGCCCTCCCCACCATACCTGTTCTCCCCACCAAAGCCAGAGGCAGCAGTCGGGTGAGGGTGAGGGATGTTCTCCTTACCCTGTGGTGTTTCTGGATTCGCGACCGCATATCCCCCATAACCGGCGGCCCCGGGGTTGACCTCTGGCCCAGGAAGATTGCCACTGCCTCCTTTTCCCTGGAACACATGAAGACCGTCAAGCGGGCTGTTCACGATGCGACCATAAATGACGTTCTATTTGCAATTATATCATTTGGGATATCAAGATACCTGGACTTCCGAGAACCTAATGGGTTGCGAGACGGTGTTCAGCTAACAGGATTGGCTATGGCTAACTTAAGAAAGCAGCCGGGATTGCAGGAACTGTCCAATTTGATGAGAAGCAATTCAGGGGCAAGGTGGGGCAACAAATTTGGTATGATTCTACTGCCTATATATTATCATAGAAGCAACAGTTCAGATCCGCAAGAATATTTGAAGAGAGCTAAAGTAACGATTGACAAAAAGAAACAATCTTTGGAGGCCCATTTCTCATACAAAATTGGAGATTTTGTAATGTCGACTCTTGGTCCAAAGTTTGCTAGCTTGCTAAATTATCGGATACTCTGTAACACTACCTTTACAATCTCAAACGTGGTTGGCCCCCAAGAGGAGATTATGATTGGAGGCAATCCTGTAACGTTCTTAAGGGCAAATAATTCTGCCTTGCCTCATGCACTTGTTTTGAATATGGTGAGCTATGCTGGAAGGGCAGACATGCAAGTGCAGGTGGCCAAAGACATCATTCCTGATCCTGAGTTTCTTGCCAAGTTGTTTGAAGATGCATTACTTGAAATGAAGGAGCAGGTTACCGGCCAAAAGCTGACATTTGGAGCACTTTGTTTTTGTTGAATGTGGCAACGACAAATGTTGAAGTTACAACGAGTATTGAGATACATGTGATCACAGGCAACGAACTATCTTTCTTAGATGTTATAAACGGACTGATTTGTGATCCATTCGTCTCTTTCTTGCCATTGATAGCTTGTATGACCTATTAAAAAAACTTTTATTCACAAGTTCGATGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00165	129001	134746	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0045017 glycerolipid biosynthetic process

molecular_function
GO:0004144 diacylglycerol O-acyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000165s00008500.1	PF03007.11	WES_acyltransf	32	160	4.50E-08
Glyur000165s00008500.1	PF06974.8	DUF1298	268	420	8.80E-51

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.925
SRR1783600	control	8.843
SRR1783602	moderate drought stress	15.224
SRR1811619	moderate drought stress	14.984

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.332
DRR006520	Root Summer glycyrrhizin high producing strain	3.081
DRR006521	Root Winter glycyrrhizin high producing strain	0.564
DRR006522	Root Winter glycyrrhizin high producing strain	0.477
DRR006523	Root Summer glycyrrhizin low producing strain	0.593
DRR006524	Root Summer glycyrrhizin low producing strain	0.220
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.787
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.440

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.608
SRR2868004	Drought Stress (root)	3.134
SRR2967015	Control (root)	1.919

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.994
SRR9715740	Leaf	1.106
SRR9715741	Leaf	4.312
SRR9715739	Root	2.089
SRR9715742	Root	6.042
SRR9715743	Root	4.754

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.742
SRR8749028	MeJA induced 9h	14.068
SRR8749029	MeJA induced 9h	10.574
SRR8749030	Uninduced	5.716
SRR8749031	Uninduced	2.399
SRR8749032	Uninduced	2.214

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.630
SRR8400027	Control - Root	18.580