Gene detail information of Glyur000164s00014507 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G45207.2 | 2.00E-109 | Remorin family protein |
| NR | XP_004499051.1 | 0 | PREDICTED: uncharacterized protein LOC101504376 isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9M2D8|Y3126_ARATH | 1.00E-11 | Uncharacterized protein At3g61260 |
| trEMBL | tr|V7CTZ3|V7CTZ3_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW32853.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 288206 | 293090 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000164s00014507.1 | PF03763.8 | Remorin_C | 494 | 598 | 8.20E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.336 |
| SRR1783600 | control | 15.270 |
| SRR1783602 | moderate drought stress | 7.326 |
| SRR1811619 | moderate drought stress | 7.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.168 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.903 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.901 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.642 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.380 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.716 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.284 |
| SRR2868004 | Drought Stress (root) | 15.348 |
| SRR2967015 | Control (root) | 21.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.819 |
| SRR9715740 | Leaf | 1.063 |
| SRR9715741 | Leaf | 0.996 |
| SRR9715739 | Root | 3.993 |
| SRR9715742 | Root | 6.219 |
| SRR9715743 | Root | 5.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.067 |
| SRR8749028 | MeJA induced 9h | 11.724 |
| SRR8749029 | MeJA induced 9h | 11.762 |
| SRR8749030 | Uninduced | 3.611 |
| SRR8749031 | Uninduced | 7.392 |
| SRR8749032 | Uninduced | 7.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.583 |
| SRR8400027 | Control - Root | 25.248 |