Gene detail information of Glyur000164s00014501 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42900.3 | 1.00E-06 | cold regulated gene 27 |
| NR | XP_006595968.1 | 1.57E-51 | PREDICTED: uncharacterized protein LOC100781222 isoform X2 [Glycine max] |
| trEMBL | tr|K7M5L5|K7M5L5_SOYBN | 6.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G09120.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 253005 | 259959 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.246 |
| SRR1783600 | control | 0.260 |
| SRR1783602 | moderate drought stress | 0.627 |
| SRR1811619 | moderate drought stress | 0.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.165 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.898 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.655 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.312 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 138.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 136.561 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.144 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.589 |
| SRR2868004 | Drought Stress (root) | 2.046 |
| SRR2967015 | Control (root) | 13.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.773 |
| SRR9715740 | Leaf | 2.841 |
| SRR9715741 | Leaf | 1.505 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.102 |
| SRR9715743 | Root | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.956 |
| SRR8749028 | MeJA induced 9h | 59.505 |
| SRR8749029 | MeJA induced 9h | 202.697 |
| SRR8749030 | Uninduced | 52.922 |
| SRR8749031 | Uninduced | 223.374 |
| SRR8749032 | Uninduced | 174.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.688 |
| SRR8400027 | Control - Root | 3.354 |