Gene detail

Gene detail information of Glyur000164s00014494

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G19270.1	2.00E-150	cytochrome P450, family 707, subfamily A, polypeptide 4
NR	AES59434.2	0	cytochrome P450 family ABA 8'-hydroxylase [Medicago truncatula]
COG	YP_001659897.1	3.00E-51	cytochrome P450 [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q0J185\|ABAH3_ORYSJ	0	Abscisic acid 8'-hydroxylase 3
trEMBL	tr\|G7I3J9\|G7I3J9_MEDTR	0	Cytochrome P450 family ABA 8'-hydroxylase {ECO:0000313\|EMBL:AES59434.2}

Sequence

Transcript Sequence

>Glyur000164s00014494.1
GATTAGCAGAGCTCAAAACATTCTGCAACATTTTTTTGTTGTTGTTAGGAAAAGGCTAACCAACCTTCTGACTTTTCAAAACAAGAGTCTTTGTAAATTGTAACACTCCCAAATGGATGGAACCTTCGCTTACATTATTGTCTCTCTCCTTACCTTATTCTCATTCACTTTCTTATTCTTACTAAAACGAAAAAGAACAACACCTCGGAACCAAACAAGAGCAAAGCTTCCTCCAGGTTCAATGGGATGGCCGTACATAGGACAAACCCTCCAACTCTACTCCACAGACCCNAACGTTTTCTTCTCCACCAAACAGAAAAGGTACGGCGAAATATTCAAGACTAACATCCTGGGTTGTCCGTGTGTGATGCTGGCAAGCCCAGAGGCGGCGCGTTTCGTGTTGGTGACACAAGCTCACTTGTTTAAGCCAACATACCCGAAAAACAAGGAACGGTTAATTGGGCCTTGTGCTCTGTTTTTCCACCAAGGTGAGTACCACGCGCGCTTGAGGAAACTGGTTCAGAGATCCCTCTCCTTTGAAGCACTTCGCAACTTGGTTCCTGATATTGAAGCCTTAGCCATATCCACCATGAAATCTTGGGGTAACGATGATGGAAGCATAATTAACACGTTTAAGGAAATGAAAAGATTTTCTTTTGAAGTTGGTATTCTCACAGTTTTTGGCCATCTAGAGCCACGGTTGAGGGAGGAGTTAAAGAAGAACTACTGGATTGCAAGAAAGAGACTTGGGGATATTATAGGGGAAATAATTAGTGAGAGGAAGGAGAAGAAGTTGCTTGAAACTGAAAGGGATCTCTTGAGCTGCTTACTGAACTGGAAGAAAGGTGAAGGAGAAATCTTATCTGATGACCAAATTGCTGATAACATTATTGGGGTGCTTTTTGCTGCTCAAGACACCACAGCTACTGCCATGACATGGGTTGCTGAGCAGAAGACAATTCAAAAGGCAAATGAAGGTAACTTACCGATGAGTTGGAATCAGACTAGAAACATGCCAATTACCTATAAGGTTGTGTTAGAGAGCTTGAGAATGGCAAGCGTTATATCATTCCCTTTTAGAGAAGCAGTAACTGATGTAGAGTACAAGGGGTTCCTAATACCAAAAGGGTGGAAAGCAATGCCCCTGTTCAGAAATATTCATCACAATTCAGAATTTTTTCCAGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTTCCACCAAAACCCAATACTTTCATGCCATTTGGTAGTGGAGTACATGCCTGTCCTGGCAATGAGCTCGCTAAGCTGGAGATCCTGATTATGATNCATCATTTGGTCACCAAGTTGGAAGTGGTAGGATCGCAGTGTGGGATTCAGTATGGCCCATTCCCACTGCCCCTTGATGGACTCCCTGCTAGATGTTGGAGAGAATCTACCAGCAGCTAGAAAAGCAAAGCAACATGGAAGGAAGAAATGAATTAATGACATCATTGCTGAGAAGCAATCCACTTTTCCAAAGTCACAGATCTTTTTTTTTCTTTCATTATCTCTTTTCTATTTTAATTTATCTGTGTATTTTTTTTTTCATGGTGGGCACTTTCATTTTTTGCCCCCTTTTATCCTCAAAATTGCCCCTAGGAGGTATCCTGAAAAAAAAAAGAAGCGAAATGCCTCAATAGGGGATGGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00164	207466	211372	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP707A4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K09843	E1.14.13.93	EC:1.14.13.93	Carotenoid biosynthesis	map00906

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000164s00014494.1	PF00067.17	p450	40	192	2.30E-13
Glyur000164s00014494.1	PF00067.17	p450	199	409	1.50E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.242
SRR1783600	control	4.389
SRR1783602	moderate drought stress	10.100
SRR1811619	moderate drought stress	10.301

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.733
DRR006520	Root Summer glycyrrhizin high producing strain	5.424
DRR006521	Root Winter glycyrrhizin high producing strain	5.375
DRR006522	Root Winter glycyrrhizin high producing strain	5.135
DRR006523	Root Summer glycyrrhizin low producing strain	4.597
DRR006524	Root Summer glycyrrhizin low producing strain	4.716
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.557
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.347

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.770
SRR2868004	Drought Stress (root)	4.049
SRR2967015	Control (root)	6.029

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.587
SRR9715740	Leaf	43.707
SRR9715741	Leaf	24.228
SRR9715739	Root	0.031
SRR9715742	Root	2.900
SRR9715743	Root	1.888

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.112
SRR8749028	MeJA induced 9h	0.032
SRR8749029	MeJA induced 9h	0.001
SRR8749030	Uninduced	0.105
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.090

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.707
SRR8400027	Control - Root	7.726