Gene detail information of Glyur000164s00014489 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G25010.1 | 4.00E-14 | Aminotransferase-like, plant mobile domain family protein |
| NR | XP_004492239.1 | 2.85E-60 | PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cicer arietinum] |
| Swissprot | tr|Q9LNG5|PPP7L_ARATH | 3.00E-07 | Serine/threonine-protein phosphatase 7 long form homolog |
| trEMBL | tr|V7CPX9|V7CPX9_PHAVU | 8.00E-41 | Uncharacterized protein {ECO:0000313|EMBL:ESW31300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 176442 | 177940 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000164s00014489.1 | PF10536.4 | PMD | 57 | 281 | 5.30E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.602 |
| SRR1783600 | control | 1.695 |
| SRR1783602 | moderate drought stress | 2.697 |
| SRR1811619 | moderate drought stress | 2.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.909 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.859 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.759 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.256 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.690 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.718 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.618 |
| SRR2868004 | Drought Stress (root) | 11.894 |
| SRR2967015 | Control (root) | 9.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.715 |
| SRR9715740 | Leaf | 0.284 |
| SRR9715741 | Leaf | 2.617 |
| SRR9715739 | Root | 0.033 |
| SRR9715742 | Root | 2.650 |
| SRR9715743 | Root | 1.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.902 |
| SRR8749028 | MeJA induced 9h | 1.745 |
| SRR8749029 | MeJA induced 9h | 1.216 |
| SRR8749030 | Uninduced | 3.302 |
| SRR8749031 | Uninduced | 1.268 |
| SRR8749032 | Uninduced | 1.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.595 |
| SRR8400027 | Control - Root | 2.542 |