Gene detail information of Glyur000164s00014481 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49260.3 | 6.00E-44 | IQ-domain 21 |
| NR | XP_004498512.1 | 0 | PREDICTED: protein IQ-DOMAIN 1-like [Cicer arietinum] |
| Swissprot | tr|Q9SF32|IQD1_ARATH | 2.00E-21 | Protein IQ-DOMAIN 1 |
| trEMBL | tr|V7CTN4|V7CTN4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW33504.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 69335 | 89543 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000164s00014481.1 | PF00612.22 | IQ | 124 | 144 | 4.40E-07 |
| Glyur000164s00014481.1 | PF00612.22 | IQ | 150 | 165 | 0.17 |
| Glyur000164s00014481.1 | PF13178.1 | DUF4005 | 383 | 459 | 4.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.437 |
| SRR1783600 | control | 21.560 |
| SRR1783602 | moderate drought stress | 4.670 |
| SRR1811619 | moderate drought stress | 4.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.924 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.603 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.923 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.799 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.546 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.679 |
| SRR2868004 | Drought Stress (root) | 5.749 |
| SRR2967015 | Control (root) | 4.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.545 |
| SRR9715740 | Leaf | 2.884 |
| SRR9715741 | Leaf | 4.183 |
| SRR9715739 | Root | 5.696 |
| SRR9715742 | Root | 6.289 |
| SRR9715743 | Root | 5.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.034 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.100 |
| SRR8749030 | Uninduced | 0.078 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.755 |
| SRR8400027 | Control - Root | 18.711 |