Gene detail information of Glyur000164s00014480 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53030.1 | 2.00E-16 | |
| NR | KEH39728.1 | 1.18E-83 | hypothetical protein MTR_1g007905 [Medicago truncatula] |
| trEMBL | tr|A0A072VE41|A0A072VE41_MEDTR | 4.00E-84 | Uncharacterized protein {ECO:0000313|EMBL:KEH39728.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 63252 | 66434 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.639 |
| SRR1783600 | control | 13.390 |
| SRR1783602 | moderate drought stress | 14.609 |
| SRR1811619 | moderate drought stress | 14.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 48.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.818 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.770 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.457 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 61.774 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.949 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.502 |
| SRR2868004 | Drought Stress (root) | 14.160 |
| SRR2967015 | Control (root) | 24.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 83.106 |
| SRR9715740 | Leaf | 81.201 |
| SRR9715741 | Leaf | 81.188 |
| SRR9715739 | Root | 23.916 |
| SRR9715742 | Root | 41.757 |
| SRR9715743 | Root | 40.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.837 |
| SRR8749028 | MeJA induced 9h | 49.968 |
| SRR8749029 | MeJA induced 9h | 49.333 |
| SRR8749030 | Uninduced | 58.846 |
| SRR8749031 | Uninduced | 12.761 |
| SRR8749032 | Uninduced | 15.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.863 |
| SRR8400027 | Control - Root | 27.449 |